G894596


Basic Information

Item Value
gene id G894596
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 46950976 ~ 46951466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017776
GGGAGCAACATTTAAAGCTGTAGgggataattgcgttgtttgctctattaACTCTTCGTTCATATGCCACCGTGATATACAATAAGGCCgtgacaacaaaaagacaacagtcacactgtggcggaataaattcaactacacgtacgtttgtttcatcacaaaaccagagggcaacatctgtccggtgaagtccacaaagcaaatattgcagcatggtcaagcaagttcatgTTTTTGACAGTTTACTAAATGCATAACGactgatttagaaccatggagTTGCAGCAAGGCAGCACAAAGACGACAGGAGCACTGCCTCCGCTATTCCAGCCCCATTTCAACTTAAACATGTAAACGTTGTCAAATCAACAAGGCTGTATACTGAGACAgactaaagaaggatttttaagccttgagaaaattgagacatggattgtgtacgtgtgccattcaaagggtgaatgggcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017776 True 468 lncRNA 0.42 2 46950976 46951466

Neighbor

gene id symbol gene type direction distance location
LOC110534110 LOC106603042 coding upstream 55985 46888000 ~ 46894991 (+)
LOC110534109 NA coding upstream 83372 46864047 ~ 46867604 (+)
LOC110534107 LOC106603045 coding upstream 151222 46765048 ~ 46799754 (+)
LOC110534106 LOC106603046 coding upstream 203250 46732876 ~ 46747726 (+)
LOC110534104 LOC106603047 coding upstream 220249 46721765 ~ 46730727 (+)
LOC110534113 LOC106603039 coding downstream 57883 47009349 ~ 47016212 (+)
LOC110533128 LOC106603037 coding downstream 79963 47031429 ~ 47034505 (+)
LOC110534117 UBE2D2 coding downstream 172403 47123869 ~ 47127973 (+)
LOC110511048 LOC106603033 coding downstream 180669 47132135 ~ 47151549 (+)
LOC110534120 LOC106563662 coding downstream 307775 47259241 ~ 47374572 (+)
G894569 NA non-coding upstream 12029 46900272 ~ 46938947 (+)
G894519 NA non-coding upstream 53147 46896938 ~ 46897829 (+)
G894518 NA non-coding upstream 54157 46895870 ~ 46896819 (+)
G894561 NA non-coding upstream 69439 46881246 ~ 46881537 (+)
G894558 NA non-coding upstream 76976 46873589 ~ 46874000 (+)
G895475 NA non-coding downstream 19987 46971453 ~ 46971807 (+)
G895487 NA non-coding downstream 33578 46985044 ~ 46985360 (+)
G895491 NA non-coding downstream 38636 46990102 ~ 46990544 (+)
G895492 NA non-coding downstream 39697 46991163 ~ 46991443 (+)
G895517 NA non-coding downstream 92528 47043994 ~ 47044294 (+)
G894437 LOC106603023 other upstream 250436 46627292 ~ 46700540 (+)
G894204 LOC100136012 other upstream 833033 46116285 ~ 46117943 (+)
LOC110534056 LOC106603182 other upstream 1049165 45898515 ~ 45901940 (+)
LOC110534042 LOC106603097 other upstream 1307420 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 1358667 45553481 ~ 45592329 (+)
G895515 NA other downstream 89048 47040514 ~ 47042783 (+)
G895652 LOC106603032 other downstream 251459 47202925 ~ 47204842 (+)
G895658 LOC106603032 other downstream 264941 47216407 ~ 47217071 (+)
G896043 NA other downstream 958250 47909716 ~ 47910975 (+)

Expression


Co-expression Network