G895487


Basic Information

Item Value
gene id G895487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 46985044 ~ 46985360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1018849
atctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgaggggtggccagtcctcttttggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagtatggtcaaataataataatcacagtagttgtcgagggtgcaacaagtcagcacctcaggagtaaatgtcagttggcttttcatagccgatcagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1018849 True 317 lncRNA 0.46 1 46985044 46985360

Neighbor

gene id symbol gene type direction distance location
LOC110534111 LOC106603040 coding upstream 22501 46916136 ~ 46962543 (+)
LOC110534110 LOC106603042 coding upstream 90053 46888000 ~ 46894991 (+)
LOC110534109 NA coding upstream 117440 46864047 ~ 46867604 (+)
LOC110534107 LOC106603045 coding upstream 185290 46765048 ~ 46799754 (+)
LOC110534106 LOC106603046 coding upstream 237318 46732876 ~ 46747726 (+)
LOC110534113 LOC106603039 coding downstream 23989 47009349 ~ 47016212 (+)
LOC110533128 LOC106603037 coding downstream 46069 47031429 ~ 47034505 (+)
LOC110534117 UBE2D2 coding downstream 138509 47123869 ~ 47127973 (+)
LOC110511048 LOC106603033 coding downstream 146775 47132135 ~ 47151549 (+)
LOC110534120 LOC106563662 coding downstream 273881 47259241 ~ 47374572 (+)
G895475 NA non-coding upstream 13237 46971453 ~ 46971807 (+)
G894596 NA non-coding upstream 33578 46950976 ~ 46951466 (+)
G894569 NA non-coding upstream 46097 46900272 ~ 46938947 (+)
G894519 NA non-coding upstream 87215 46896938 ~ 46897829 (+)
G894518 NA non-coding upstream 88225 46895870 ~ 46896819 (+)
G895491 NA non-coding downstream 4742 46990102 ~ 46990544 (+)
G895492 NA non-coding downstream 5803 46991163 ~ 46991443 (+)
G895517 NA non-coding downstream 58634 47043994 ~ 47044294 (+)
G895516 NA non-coding downstream 59496 47044856 ~ 47045118 (+)
G895522 NA non-coding downstream 69656 47055016 ~ 47055580 (+)
G894437 LOC106603023 other upstream 284504 46627292 ~ 46700540 (+)
G894204 LOC100136012 other upstream 867101 46116285 ~ 46117943 (+)
LOC110534056 LOC106603182 other upstream 1083233 45898515 ~ 45901940 (+)
LOC110534042 LOC106603097 other upstream 1341488 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 1392735 45553481 ~ 45592329 (+)
G895515 NA other downstream 55154 47040514 ~ 47042783 (+)
G895652 LOC106603032 other downstream 217565 47202925 ~ 47204842 (+)
G895658 LOC106603032 other downstream 231047 47216407 ~ 47217071 (+)
G896043 NA other downstream 924356 47909716 ~ 47910975 (+)

Expression


Co-expression Network