G895516


Basic Information

Item Value
gene id G895516
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 47044856 ~ 47045118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1018881
ttccaaggttgtggcaaaatggcttaaggacaacaaagtcaaggtatttgagtggccatcacaaagccctgacctcaaccctatagaacatttgagggcagaactgaaaaagcatgtgcgagcaaggaggcctacaaacctgactcatgtacaccagctctgtcaggaggaatgggccaaaaatcacccaacttattgtgcgacgcttgtggaaggctacccgaaacgtttgacccaagttaaacaatttaaagacaatgcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1018881 True 263 lncRNA 0.46 1 47044856 47045118

Neighbor

gene id symbol gene type direction distance location
LOC110533128 LOC106603037 coding upstream 10351 47031429 ~ 47034505 (+)
LOC110534113 LOC106603039 coding upstream 28644 47009349 ~ 47016212 (+)
LOC110534111 LOC106603040 coding upstream 82313 46916136 ~ 46962543 (+)
LOC110534110 LOC106603042 coding upstream 149865 46888000 ~ 46894991 (+)
LOC110534109 NA coding upstream 177252 46864047 ~ 46867604 (+)
LOC110534117 UBE2D2 coding downstream 78751 47123869 ~ 47127973 (+)
LOC110511048 LOC106603033 coding downstream 87017 47132135 ~ 47151549 (+)
LOC110534120 LOC106563662 coding downstream 214123 47259241 ~ 47374572 (+)
LOC110533129 NA coding downstream 364269 47409387 ~ 47420005 (+)
LOC118936698 NA coding downstream 375709 47420827 ~ 47426481 (+)
G895517 NA non-coding upstream 562 47043994 ~ 47044294 (+)
G895492 NA non-coding upstream 53413 46991163 ~ 46991443 (+)
G895491 NA non-coding upstream 54312 46990102 ~ 46990544 (+)
G895487 NA non-coding upstream 59496 46985044 ~ 46985360 (+)
G895475 NA non-coding upstream 73049 46971453 ~ 46971807 (+)
G895522 NA non-coding downstream 9898 47055016 ~ 47055580 (+)
G895527 NA non-coding downstream 10998 47056116 ~ 47056523 (+)
G895617 NA non-coding downstream 77409 47122527 ~ 47122815 (+)
G895621 NA non-coding downstream 84903 47130021 ~ 47130240 (+)
G895632 NA non-coding downstream 108540 47153658 ~ 47153895 (+)
G895515 NA other upstream 2073 47040514 ~ 47042783 (+)
G894437 LOC106603023 other upstream 344316 46627292 ~ 46700540 (+)
G894204 LOC100136012 other upstream 926913 46116285 ~ 46117943 (+)
LOC110534056 LOC106603182 other upstream 1143045 45898515 ~ 45901940 (+)
LOC110534042 LOC106603097 other upstream 1401300 45622164 ~ 45654911 (+)
G895652 LOC106603032 other downstream 157807 47202925 ~ 47204842 (+)
G895658 LOC106603032 other downstream 171289 47216407 ~ 47217071 (+)
G896043 NA other downstream 864598 47909716 ~ 47910975 (+)
G896217 NA other downstream 1190064 48235182 ~ 48235616 (+)

Expression


Co-expression Network