G895647


Basic Information

Item Value
gene id G895647
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 47190706 ~ 47190938 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1019018
aggagagccAGTGATAGACCCAGGTACAAAGTGAGATTTATAGCGGGAGAGAAGAATGAGGAAATAGATgggggacacagagagaaagagagatatttaCCTCATCCACATTCTGTAAACCGTCTGGATTACGCAGTGGAGCAGGAGGGAGTCTGTTTTAATGAAAGCACAGGAAGGGGGCAGCAGCTGGTGGCGTGTGTTTGAGCCGAGAGGATAAGaccaccccccccacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1019018 True 233 lncRNA 0.51 1 47190706 47190938

Neighbor

gene id symbol gene type direction distance location
LOC110511048 LOC106603033 coding upstream 39362 47132135 ~ 47151549 (+)
LOC110534117 UBE2D2 coding upstream 62733 47123869 ~ 47127973 (+)
LOC110533128 LOC106603037 coding upstream 156201 47031429 ~ 47034505 (+)
LOC110534113 LOC106603039 coding upstream 174494 47009349 ~ 47016212 (+)
LOC110534111 LOC106603040 coding upstream 228163 46916136 ~ 46962543 (+)
LOC110534120 LOC106563662 coding downstream 68303 47259241 ~ 47374572 (+)
LOC110533129 NA coding downstream 218449 47409387 ~ 47420005 (+)
LOC118936698 NA coding downstream 229889 47420827 ~ 47426481 (+)
LOC110533130 LOC106602987 coding downstream 235680 47426618 ~ 47849279 (+)
LOC110534124 LOC106602984 coding downstream 666552 47857490 ~ 47887278 (+)
G895632 NA non-coding upstream 36811 47153658 ~ 47153895 (+)
G895621 NA non-coding upstream 60466 47130021 ~ 47130240 (+)
G895617 NA non-coding upstream 67891 47122527 ~ 47122815 (+)
G895527 NA non-coding upstream 134183 47056116 ~ 47056523 (+)
G895522 NA non-coding upstream 135126 47055016 ~ 47055580 (+)
G895655 NA non-coding downstream 20073 47211011 ~ 47211229 (+)
G895656 NA non-coding downstream 21310 47212248 ~ 47212448 (+)
G895660 NA non-coding downstream 26945 47217883 ~ 47218117 (+)
G895663 NA non-coding downstream 33340 47224278 ~ 47224517 (+)
G895709 NA non-coding downstream 101229 47292167 ~ 47343570 (+)
G895515 NA other upstream 147923 47040514 ~ 47042783 (+)
G894437 LOC106603023 other upstream 490166 46627292 ~ 46700540 (+)
G894204 LOC100136012 other upstream 1072763 46116285 ~ 46117943 (+)
LOC110534056 LOC106603182 other upstream 1288895 45898515 ~ 45901940 (+)
G895652 LOC106603032 other downstream 11987 47202925 ~ 47204842 (+)
G895658 LOC106603032 other downstream 25469 47216407 ~ 47217071 (+)
G896043 NA other downstream 718778 47909716 ~ 47910975 (+)
G896217 NA other downstream 1044244 48235182 ~ 48235616 (+)
G897244 dach2 other downstream 1485319 48676257 ~ 48677065 (+)

Expression


Co-expression Network