G895660


Basic Information

Item Value
gene id G895660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 47217883 ~ 47218117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1019033
CGCtcctcgtacacacacacatttattttacctttatttaactaggcaagtaatttaagaacaaattctgatttacaacgacggccgacaccggccaaacccggacggcgctgggccaattgtgcgccgccctatgggactcccaatcacggccggttgtgatacagcctgcatgtgcgcacacacacgcacacacaaacaaaaagaaCACAAAACGAAACAATCACTCAGAAAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1019033 True 235 lncRNA 0.49 1 47217883 47218117

Neighbor

gene id symbol gene type direction distance location
LOC110511048 LOC106603033 coding upstream 66539 47132135 ~ 47151549 (+)
LOC110534117 UBE2D2 coding upstream 89910 47123869 ~ 47127973 (+)
LOC110533128 LOC106603037 coding upstream 183378 47031429 ~ 47034505 (+)
LOC110534113 LOC106603039 coding upstream 201671 47009349 ~ 47016212 (+)
LOC110534111 LOC106603040 coding upstream 255340 46916136 ~ 46962543 (+)
LOC110534120 LOC106563662 coding downstream 41124 47259241 ~ 47374572 (+)
LOC110533129 NA coding downstream 191270 47409387 ~ 47420005 (+)
LOC118936698 NA coding downstream 202710 47420827 ~ 47426481 (+)
LOC110533130 LOC106602987 coding downstream 208501 47426618 ~ 47849279 (+)
LOC110534124 LOC106602984 coding downstream 639373 47857490 ~ 47887278 (+)
G895656 NA non-coding upstream 5435 47212248 ~ 47212448 (+)
G895655 NA non-coding upstream 6654 47211011 ~ 47211229 (+)
G895647 NA non-coding upstream 26945 47190706 ~ 47190938 (+)
G895632 NA non-coding upstream 63988 47153658 ~ 47153895 (+)
G895621 NA non-coding upstream 87643 47130021 ~ 47130240 (+)
G895663 NA non-coding downstream 6161 47224278 ~ 47224517 (+)
G895709 NA non-coding downstream 74050 47292167 ~ 47343570 (+)
G895717 NA non-coding downstream 83734 47301851 ~ 47306718 (+)
G895687 NA non-coding downstream 164949 47383066 ~ 47384234 (+)
G895724 NA non-coding downstream 170724 47388841 ~ 47404280 (+)
G895658 LOC106603032 other upstream 812 47216407 ~ 47217071 (+)
G895652 LOC106603032 other upstream 13041 47202925 ~ 47204842 (+)
G895515 NA other upstream 175100 47040514 ~ 47042783 (+)
G894437 LOC106603023 other upstream 517343 46627292 ~ 46700540 (+)
G896043 NA other downstream 691599 47909716 ~ 47910975 (+)
G896217 NA other downstream 1017065 48235182 ~ 48235616 (+)
G897244 dach2 other downstream 1458140 48676257 ~ 48677065 (+)
LOC110534184 LOC106563731 other downstream 2059585 49277626 ~ 49282746 (+)
LOC110534189 LOC106602925 other downstream 2212282 49426785 ~ 49432958 (+)

Expression


Co-expression Network