G895855


Basic Information

Item Value
gene id G895855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 47614295 ~ 47618736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1019298
gaggctactgtatgtgttgtaattagagaggctactgtatgtgttgtaattataggatgctgtatgtgttgtaatttcagagcctactgtatgtgttgtaatttcagaggctactgtatgtgtaatAGTTAGAGAGGTTAATGTATGTGTTGTTATTAAAGAGGCTActaaatgtgttgtaattagagaggatactgtatgtgttgtaattagagagtctactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1019298 True 224 lncRNA 0.35 2 47614295 47618736

Neighbor

gene id symbol gene type direction distance location
LOC118936698 NA coding upstream 187814 47420827 ~ 47426481 (+)
LOC110533129 NA coding upstream 194290 47409387 ~ 47420005 (+)
LOC110534120 LOC106563662 coding upstream 239723 47259241 ~ 47374572 (+)
LOC110511048 LOC106603033 coding upstream 462951 47132135 ~ 47151549 (+)
LOC110534117 UBE2D2 coding upstream 486322 47123869 ~ 47127973 (+)
LOC110534124 LOC106602984 coding downstream 238754 47857490 ~ 47887278 (+)
LOC110534126 LOC106602983 coding downstream 282823 47901559 ~ 47905308 (+)
cfb LOC106602980 coding downstream 318627 47937363 ~ 47950461 (+)
LOC110534131 LOC106602979 coding downstream 344699 47963435 ~ 47987449 (+)
rin1a LOC106602976 coding downstream 403322 48022058 ~ 48029576 (+)
G895862 NA non-coding upstream 83 47606354 ~ 47614212 (+)
G895863 NA non-coding upstream 979 47607220 ~ 47613316 (+)
G895839 NA non-coding upstream 17239 47524694 ~ 47597056 (+)
G895845 NA non-coding upstream 69031 47522892 ~ 47545264 (+)
G895724 NA non-coding upstream 210015 47388841 ~ 47404280 (+)
G896044 NA non-coding downstream 288503 47907239 ~ 47909591 (+)
G896098 NA non-coding downstream 339728 47958464 ~ 47958684 (+)
G896052 NA non-coding downstream 368981 47987717 ~ 47989065 (+)
G896056 NA non-coding downstream 370397 47989133 ~ 47989348 (+)
G896122 NA non-coding downstream 392125 48010861 ~ 48011074 (+)
G895658 LOC106603032 other upstream 397224 47216407 ~ 47217071 (+)
G895652 LOC106603032 other upstream 409453 47202925 ~ 47204842 (+)
G895515 NA other upstream 571512 47040514 ~ 47042783 (+)
G894437 LOC106603023 other upstream 913755 46627292 ~ 46700540 (+)
G896043 NA other downstream 290980 47909716 ~ 47910975 (+)
G896217 NA other downstream 616446 48235182 ~ 48235616 (+)
G897244 dach2 other downstream 1057521 48676257 ~ 48677065 (+)
LOC110534184 LOC106563731 other downstream 1658966 49277626 ~ 49282746 (+)
LOC110534189 LOC106602925 other downstream 1811663 49426785 ~ 49432958 (+)

Expression


Co-expression Network