G896155 (fam89b)


Basic Information

Item Value
gene id G896155
gene name fam89b
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 48104479 ~ 48106981 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1019620
ataaaaagttaaataTATAAACTGCACATACACAACAAACAAAAACGAGTAATACAGGCTTGTGTGTATATGGCTACGTGTCTAAGACCACATTCAATCTTAAAATTGTAGGAGAAAATTACAAGGCATTAACAATCCTAAGCCATTGACATCAGACACTGCCACTGAACCAGTCTTCAAATGTATCAATGAGTGTGATTGGTTACCAATAACATATGTTCAATTAATTGTAGGCATTGTGTACTTACATCCAATCGTAGGTAACAAATGACACCAAATTCAAATGCCTCCAATTCACCAGGTATCTGAAATACTGTATGGCTTTTCTTTTCAAGATGGGCACAATCAGTCCAAATATATTAGCAAGGTCTTTTGAATATAAATTGTATAATTACAAGGTTGTTGTAGAAAATGTCAGCTCCTTGTTTGATGAAGACAGTTCAGATCAGAATGGTGCCCGTTTGAATATGTCCTTCTGCCAATAAACTAGGTGGGTACCagtataatacataatataaagGCTATACAGAACAGGGAACAGTTAATATTATGTAAATATTGAGAAAAATATGTGTAAGTTTATAAGGGGATGTGGAAAGACTCTTTGATCCATTGGTCACGAGAGTTTTGAGTTGGCTGGAGAGTCAGTGAAGTGCCAGGTGGATCCCTAGGTACATTGTCAACATCGTTGTCCTCCTCTtcgtcatcctcctctccctcagagTAACCATTTTCTGTAGTGAAGGTGCTCTCTGAAAGCAGAGAGGATGAGATATCCTGGAAGGCTCCTTTATACTCCTGGATAGACTCTGGCTCTTAT

Function

symbol description
fam89b Orthologous to several human genes including FAM89B (family with sequence similarity 89 member B).

NR:

description
protein FAM89B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1019620 True 820 lncRNA 0.38 2 48104479 48106981

Neighbor

gene id symbol gene type direction distance location
trnas-gcu-8 NA coding upstream 62346 48042052 ~ 48042133 (+)
rin1a LOC106602976 coding upstream 74903 48022058 ~ 48029576 (+)
LOC110534131 LOC106602979 coding upstream 117030 47963435 ~ 47987449 (+)
cfb LOC106602980 coding upstream 154018 47937363 ~ 47950461 (+)
LOC110534126 LOC106602983 coding upstream 199171 47901559 ~ 47905308 (+)
LOC110534142 mcf2 coding downstream 36147 48143128 ~ 48158290 (+)
LOC110534145 fgf13 coding downstream 62021 48169002 ~ 48187520 (+)
LOC110534146 zic3 coding downstream 94404 48201242 ~ 48205374 (+)
LOC110534150 snx12 coding downstream 187204 48294185 ~ 48305120 (+)
LOC110534152 LOC106602957 coding downstream 200970 48307951 ~ 48321819 (+)
G896058 LOC106602975 non-coding upstream 54628 48046890 ~ 48049851 (+)
G896132 NA non-coding upstream 60498 48043768 ~ 48043981 (+)
G896130 NA non-coding upstream 61604 48042651 ~ 48042875 (+)
G896128 NA non-coding upstream 62717 48041510 ~ 48041762 (+)
G896124 LOC106602978 non-coding upstream 83817 48020307 ~ 48020662 (+)
G896210 NA non-coding downstream 111069 48218050 ~ 48218407 (+)
G896212 NA non-coding downstream 113387 48220368 ~ 48220649 (+)
G896226 LOC106602963 non-coding downstream 140248 48247229 ~ 48248088 (+)
LOC110534159 LOC106602952 non-coding downstream 394913 48490263 ~ 48503743 (+)
G896043 NA other upstream 193504 47909716 ~ 47910975 (+)
G895658 LOC106603032 other upstream 887408 47216407 ~ 47217071 (+)
G895652 LOC106603032 other upstream 899637 47202925 ~ 47204842 (+)
LOC110511048 LOC106603033 other upstream 952930 47132135 ~ 47151549 (+)
G895515 NA other upstream 1061696 47040514 ~ 47042783 (+)
G896217 NA other downstream 128201 48235182 ~ 48235616 (+)
G897244 dach2 other downstream 569276 48676257 ~ 48677065 (+)
LOC110534184 LOC106563731 other downstream 1170721 49277626 ~ 49282746 (+)
LOC110534189 LOC106602925 other downstream 1323418 49426785 ~ 49432958 (+)
G898894 LOC106603005 other downstream 1928009 50034990 ~ 50037685 (+)

Expression


Co-expression Network