Gene
RNA
| Item | Value |
|---|---|
| gene id | G896998 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 48213789 ~ 48213995 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc3 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1020526 | True | 207 | lncRNA | 0.49 | 1 | 48213789 | 48213995 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534147 | LOC106602966 | coding | downstream | 715 | 48206906 ~ 48213074 (-) |
| f9b | f9 | coding | downstream | 49941 | 48158538 ~ 48163848 (-) |
| LOC110533132 | LOC106603010 | coding | downstream | 90261 | 48121001 ~ 48123528 (-) |
| LOC110534140 | LOC106602970 | coding | downstream | 100426 | 48108673 ~ 48113363 (-) |
| fam89b | fam89b | coding | downstream | 105342 | 48104429 ~ 48108447 (-) |
| htatsf1 | LOC100135780 | coding | upstream | 11731 | 48225726 ~ 48233416 (-) |
| LOC110533133 | LOC106602963 | coding | upstream | 33150 | 48247145 ~ 48255449 (-) |
| LOC118936699 | LOC106602963 | coding | upstream | 46331 | 48260326 ~ 48262871 (-) |
| fhl1b | fhl1 | coding | upstream | 49316 | 48263311 ~ 48284060 (-) |
| LOC118936700 | LOC106602960 | coding | upstream | 116448 | 48330443 ~ 48333177 (-) |
| G896948 | NA | non-coding | downstream | 4079 | 48116856 ~ 48209710 (-) |
| G896924 | NA | non-coding | downstream | 168662 | 48044847 ~ 48045127 (-) |
| G896923 | NA | non-coding | downstream | 169267 | 48044196 ~ 48044522 (-) |
| G896914 | NA | non-coding | downstream | 190488 | 48023050 ~ 48023301 (-) |
| G896913 | NA | non-coding | downstream | 191256 | 48022074 ~ 48022533 (-) |
| G897005 | NA | non-coding | upstream | 7935 | 48221930 ~ 48222254 (-) |
| G897007 | NA | non-coding | upstream | 9799 | 48223794 ~ 48224211 (-) |
| G897008 | NA | non-coding | upstream | 10298 | 48224293 ~ 48224717 (-) |
| G897011 | NA | non-coding | upstream | 22104 | 48236099 ~ 48236414 (-) |
| G897044 | NA | non-coding | upstream | 108853 | 48322848 ~ 48323060 (-) |
| G896841 | NA | other | downstream | 224713 | 47987761 ~ 47989076 (-) |
| LOC110534118 | LOC106603020 | other | downstream | 980743 | 47203241 ~ 47234608 (-) |
| G894917 | NA | other | downstream | 2295450 | 45917279 ~ 45918339 (-) |
| LOC110534046 | LOC107567170 | other | downstream | 2463458 | 45747090 ~ 45751405 (-) |
| LOC110534025 | LOC106603111 | other | downstream | 3197742 | 45011329 ~ 45017446 (-) |
| LOC110534172 | LOC106602940 | other | upstream | 667732 | 48881449 ~ 48907973 (-) |
| G899409 | NA | other | upstream | 1942197 | 50156192 ~ 50156902 (-) |
| G899421 | NA | other | upstream | 1968401 | 50182396 ~ 50182788 (-) |
| LOC110534220 | LOC106602898 | other | upstream | 2251472 | 50463950 ~ 50482534 (-) |
| G899727 | NA | other | upstream | 2506991 | 50720986 ~ 50721603 (-) |
