G896210


Basic Information

Item Value
gene id G896210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 48218050 ~ 48218407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1019678
gccaccaattgtgcaagttctcccacttaaaaagatttttacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggataggtttcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaacacttactttccaccataatttgcaaataaattcattaaaatcctacaatgtgattttctggattttatttctaattttgtctgtcatagttgaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1019678 True 358 lncRNA 0.37 1 48218050 48218407

Neighbor

gene id symbol gene type direction distance location
LOC110534146 zic3 coding upstream 12676 48201242 ~ 48205374 (+)
LOC110534145 fgf13 coding upstream 30530 48169002 ~ 48187520 (+)
LOC110534142 mcf2 coding upstream 59760 48143128 ~ 48158290 (+)
trnas-gcu-8 NA coding upstream 175917 48042052 ~ 48042133 (+)
rin1a LOC106602976 coding upstream 188474 48022058 ~ 48029576 (+)
LOC110534150 snx12 coding downstream 75778 48294185 ~ 48305120 (+)
LOC110534152 LOC106602957 coding downstream 89544 48307951 ~ 48321819 (+)
rab38c LOC106602959 coding downstream 114922 48333329 ~ 48336841 (+)
LOC110534154 LOC106602958 coding downstream 119102 48337509 ~ 48354802 (+)
LOC110534157 LOC106602954 coding downstream 177473 48395880 ~ 48413217 (+)
G896146 f9 non-coding upstream 57876 48098136 ~ 48160174 (+)
G896155 fam89b non-coding upstream 111069 48104479 ~ 48106981 (+)
G896058 LOC106602975 non-coding upstream 168199 48046890 ~ 48049851 (+)
G896132 NA non-coding upstream 174069 48043768 ~ 48043981 (+)
G896212 NA non-coding downstream 1961 48220368 ~ 48220649 (+)
G896226 LOC106602963 non-coding downstream 28822 48247229 ~ 48248088 (+)
LOC110534159 LOC106602952 non-coding downstream 283487 48490263 ~ 48503743 (+)
G897121 NA non-coding downstream 306119 48524526 ~ 48524766 (+)
G897165 atg4a non-coding downstream 320135 48538542 ~ 48539153 (+)
G896043 NA other upstream 307075 47909716 ~ 47910975 (+)
G895658 LOC106603032 other upstream 1000979 47216407 ~ 47217071 (+)
G895652 LOC106603032 other upstream 1013208 47202925 ~ 47204842 (+)
LOC110511048 LOC106603033 other upstream 1066501 47132135 ~ 47151549 (+)
G895515 NA other upstream 1175267 47040514 ~ 47042783 (+)
G896217 NA other downstream 16775 48235182 ~ 48235616 (+)
G897244 dach2 other downstream 457850 48676257 ~ 48677065 (+)
LOC110534184 LOC106563731 other downstream 1059295 49277626 ~ 49282746 (+)
LOC110534189 LOC106602925 other downstream 1211992 49426785 ~ 49432958 (+)
G898894 LOC106603005 other downstream 1816583 50034990 ~ 50037685 (+)

Expression


Co-expression Network