G896212


Basic Information

Item Value
gene id G896212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 48220368 ~ 48220649 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1019680
ggcatctactgccataccccattcaaaggcacttaaatcttttgtcttgcccattcaccctctgaataacacaaatacacaatccatgtctcgattgtctcaaggcttaaaaatccttctttaacctgtctcctccccttcatctacactgattgaagtggatttaacaagtgacatcaataagagatcatagctttcacctggtcagtttaagtcatggaaagagcagttgttcctaatattttgtccactcagtgtatagtgaatattacagtatactag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1019680 True 282 lncRNA 0.39 1 48220368 48220649

Neighbor

gene id symbol gene type direction distance location
LOC110534146 zic3 coding upstream 14994 48201242 ~ 48205374 (+)
LOC110534145 fgf13 coding upstream 32848 48169002 ~ 48187520 (+)
LOC110534142 mcf2 coding upstream 62078 48143128 ~ 48158290 (+)
trnas-gcu-8 NA coding upstream 178235 48042052 ~ 48042133 (+)
rin1a LOC106602976 coding upstream 190792 48022058 ~ 48029576 (+)
LOC110534150 snx12 coding downstream 73536 48294185 ~ 48305120 (+)
LOC110534152 LOC106602957 coding downstream 87302 48307951 ~ 48321819 (+)
rab38c LOC106602959 coding downstream 112680 48333329 ~ 48336841 (+)
LOC110534154 LOC106602958 coding downstream 116860 48337509 ~ 48354802 (+)
LOC110534157 LOC106602954 coding downstream 175231 48395880 ~ 48413217 (+)
G896210 NA non-coding upstream 1961 48218050 ~ 48218407 (+)
G896146 f9 non-coding upstream 60194 48098136 ~ 48160174 (+)
G896155 fam89b non-coding upstream 113387 48104479 ~ 48106981 (+)
G896058 LOC106602975 non-coding upstream 170517 48046890 ~ 48049851 (+)
G896226 LOC106602963 non-coding downstream 26580 48247229 ~ 48248088 (+)
LOC110534159 LOC106602952 non-coding downstream 281245 48490263 ~ 48503743 (+)
G897121 NA non-coding downstream 303877 48524526 ~ 48524766 (+)
G897165 atg4a non-coding downstream 317893 48538542 ~ 48539153 (+)
G897207 NA non-coding downstream 375702 48596351 ~ 48621973 (+)
G896043 NA other upstream 309393 47909716 ~ 47910975 (+)
G895658 LOC106603032 other upstream 1003297 47216407 ~ 47217071 (+)
G895652 LOC106603032 other upstream 1015526 47202925 ~ 47204842 (+)
LOC110511048 LOC106603033 other upstream 1068819 47132135 ~ 47151549 (+)
G895515 NA other upstream 1177585 47040514 ~ 47042783 (+)
G896217 NA other downstream 14533 48235182 ~ 48235616 (+)
G897244 dach2 other downstream 455608 48676257 ~ 48677065 (+)
LOC110534184 LOC106563731 other downstream 1057053 49277626 ~ 49282746 (+)
LOC110534189 LOC106602925 other downstream 1209750 49426785 ~ 49432958 (+)
G898894 LOC106603005 other downstream 1814341 50034990 ~ 50037685 (+)

Expression


Co-expression Network