G897005


Basic Information

Item Value
gene id G897005
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 48221930 ~ 48222254 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1020533
gctctggacttcagactggggcgaaggtttaccttctaacaggacaacgacccgaagcatacagccaagacaatgcaggagtggcttcgggacaagtctctgaatgtccttgagtggcccagccagagcccggtcgaacatctctggagagacctgaaaatagctgtgcagcgacgctccccatccaacctgacagaccttgagaggatctgcagagaataacgggagaaactccaaatacaggtgtgccaagcttgtagaatcatactcaagaagacttgaggctgtaatcgctgccaaaggtacttcaacaaagtactgagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1020533 True 325 lncRNA 0.51 1 48221930 48222254

Neighbor

gene id symbol gene type direction distance location
LOC110534147 LOC106602966 coding downstream 8856 48206906 ~ 48213074 (-)
f9b f9 coding downstream 58082 48158538 ~ 48163848 (-)
LOC110533132 LOC106603010 coding downstream 98402 48121001 ~ 48123528 (-)
LOC110534140 LOC106602970 coding downstream 108567 48108673 ~ 48113363 (-)
fam89b fam89b coding downstream 113483 48104429 ~ 48108447 (-)
htatsf1 LOC100135780 coding upstream 3472 48225726 ~ 48233416 (-)
LOC110533133 LOC106602963 coding upstream 24891 48247145 ~ 48255449 (-)
LOC118936699 LOC106602963 coding upstream 38072 48260326 ~ 48262871 (-)
fhl1b fhl1 coding upstream 41057 48263311 ~ 48284060 (-)
LOC118936700 LOC106602960 coding upstream 108189 48330443 ~ 48333177 (-)
G896998 NA non-coding downstream 7935 48213789 ~ 48213995 (-)
G896948 NA non-coding downstream 12220 48116856 ~ 48209710 (-)
G896924 NA non-coding downstream 176803 48044847 ~ 48045127 (-)
G896923 NA non-coding downstream 177408 48044196 ~ 48044522 (-)
G896914 NA non-coding downstream 198629 48023050 ~ 48023301 (-)
G897007 NA non-coding upstream 1540 48223794 ~ 48224211 (-)
G897008 NA non-coding upstream 2039 48224293 ~ 48224717 (-)
G897011 NA non-coding upstream 13845 48236099 ~ 48236414 (-)
G897044 NA non-coding upstream 100594 48322848 ~ 48323060 (-)
G897071 NA non-coding upstream 168217 48390471 ~ 48390695 (-)
G896841 NA other downstream 232854 47987761 ~ 47989076 (-)
LOC110534118 LOC106603020 other downstream 988884 47203241 ~ 47234608 (-)
G894917 NA other downstream 2303591 45917279 ~ 45918339 (-)
LOC110534046 LOC107567170 other downstream 2471599 45747090 ~ 45751405 (-)
LOC110534025 LOC106603111 other downstream 3205883 45011329 ~ 45017446 (-)
LOC110534172 LOC106602940 other upstream 659473 48881449 ~ 48907973 (-)
G899409 NA other upstream 1933938 50156192 ~ 50156902 (-)
G899421 NA other upstream 1960142 50182396 ~ 50182788 (-)
LOC110534220 LOC106602898 other upstream 2243213 50463950 ~ 50482534 (-)
G899727 NA other upstream 2498732 50720986 ~ 50721603 (-)

Expression


Co-expression Network