Gene
RNA
| Item | Value |
|---|---|
| gene id | G897121 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 48524526 ~ 48524766 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1020674 | True | 241 | lncRNA | 0.42 | 1 | 48524526 | 48524766 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534162 | LOC106602950 | coding | upstream | 61 | 48513122 ~ 48524465 (+) |
| LOC110534159 | LOC106602952 | coding | upstream | 21876 | 48490263 ~ 48503743 (+) |
| LOC110534160 | LOC106602953 | coding | upstream | 36017 | 48484188 ~ 48488509 (+) |
| LOC110534157 | LOC106602954 | coding | upstream | 111309 | 48395880 ~ 48413217 (+) |
| LOC110534154 | LOC106602958 | coding | upstream | 169724 | 48337509 ~ 48354802 (+) |
| LOC110533135 | NA | coding | downstream | 5053 | 48529819 ~ 48532846 (+) |
| LOC110534164 | t185l | coding | downstream | 20452 | 48545218 ~ 48549943 (+) |
| LOC110534165 | LOC106602949 | coding | downstream | 25318 | 48550084 ~ 48551178 (+) |
| LOC118936701 | NA | coding | downstream | 42810 | 48567576 ~ 48568413 (+) |
| LOC110534166 | LOC106602946 | coding | downstream | 62520 | 48587286 ~ 48624401 (+) |
| G896226 | LOC106602963 | non-coding | upstream | 276438 | 48247229 ~ 48248088 (+) |
| G896212 | NA | non-coding | upstream | 303877 | 48220368 ~ 48220649 (+) |
| G896210 | NA | non-coding | upstream | 306119 | 48218050 ~ 48218407 (+) |
| LOC110534146 | zic3 | non-coding | upstream | 319173 | 48201242 ~ 48205374 (+) |
| G897165 | atg4a | non-coding | downstream | 13776 | 48538542 ~ 48539153 (+) |
| G897207 | NA | non-coding | downstream | 71585 | 48596351 ~ 48621973 (+) |
| G897237 | NA | non-coding | downstream | 142010 | 48666776 ~ 48668107 (+) |
| LOC118936702 | NA | non-coding | downstream | 312950 | 48837072 ~ 48838821 (+) |
| G897336 | NA | non-coding | downstream | 355781 | 48880547 ~ 48880763 (+) |
| G896217 | NA | other | upstream | 288910 | 48235182 ~ 48235616 (+) |
| G896043 | NA | other | upstream | 613551 | 47909716 ~ 47910975 (+) |
| G895658 | LOC106603032 | other | upstream | 1307455 | 47216407 ~ 47217071 (+) |
| G895652 | LOC106603032 | other | upstream | 1319684 | 47202925 ~ 47204842 (+) |
| LOC110511048 | LOC106603033 | other | upstream | 1372977 | 47132135 ~ 47151549 (+) |
| G897244 | dach2 | other | downstream | 151491 | 48676257 ~ 48677065 (+) |
| LOC110534184 | LOC106563731 | other | downstream | 752936 | 49277626 ~ 49282746 (+) |
| LOC110534189 | LOC106602925 | other | downstream | 905633 | 49426785 ~ 49432958 (+) |
| G898894 | LOC106603005 | other | downstream | 1510224 | 50034990 ~ 50037685 (+) |
| G901849 | LOC106602874 | other | downstream | 3925452 | 52450218 ~ 52475365 (+) |
