Gene
RNA
| Item | Value |
|---|---|
| gene id | G897244 |
| gene name | dach2 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 48676257 ~ 48677065 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| dach2 | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within development of primary female sexual characteristics. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. |
| description |
|---|
| dachshund homolog 2-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1020802 | True | 482 | TUCP | 0.55 | 2 | 48676257 | 48677065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534166 | LOC106602946 | coding | upstream | 51856 | 48587286 ~ 48624401 (+) |
| LOC118936701 | NA | coding | upstream | 107844 | 48567576 ~ 48568413 (+) |
| LOC110534165 | LOC106602949 | coding | upstream | 125079 | 48550084 ~ 48551178 (+) |
| LOC110534164 | t185l | coding | upstream | 126314 | 48545218 ~ 48549943 (+) |
| LOC110533135 | NA | coding | upstream | 143411 | 48529819 ~ 48532846 (+) |
| chm | LOC106602942 | coding | downstream | 127960 | 48805025 ~ 48840284 (+) |
| LOC118936702 | NA | coding | downstream | 160007 | 48837072 ~ 48838821 (+) |
| LOC110534170 | frmd7 | coding | downstream | 163539 | 48840604 ~ 48855932 (+) |
| rtn3 | rtn3 | coding | downstream | 234321 | 48911386 ~ 48927265 (+) |
| LOC110534173 | LOC106602939 | coding | downstream | 268598 | 48945663 ~ 48955133 (+) |
| G897237 | NA | non-coding | upstream | 8150 | 48666776 ~ 48668107 (+) |
| G897207 | NA | non-coding | upstream | 54284 | 48596351 ~ 48621973 (+) |
| G897165 | atg4a | non-coding | upstream | 137104 | 48538542 ~ 48539153 (+) |
| G897121 | NA | non-coding | upstream | 151491 | 48524526 ~ 48524766 (+) |
| LOC110534159 | LOC106602952 | non-coding | upstream | 172514 | 48490263 ~ 48503743 (+) |
| G897336 | NA | non-coding | downstream | 203482 | 48880547 ~ 48880763 (+) |
| G897337 | NA | non-coding | downstream | 203799 | 48880864 ~ 48881140 (+) |
| G897362 | NA | non-coding | downstream | 260573 | 48937638 ~ 48964172 (+) |
| G897689 | NA | non-coding | downstream | 323087 | 49000152 ~ 49000627 (+) |
| G896217 | NA | other | upstream | 440641 | 48235182 ~ 48235616 (+) |
| G896043 | NA | other | upstream | 765282 | 47909716 ~ 47910975 (+) |
| G895658 | LOC106603032 | other | upstream | 1459186 | 47216407 ~ 47217071 (+) |
| G895652 | LOC106603032 | other | upstream | 1471415 | 47202925 ~ 47204842 (+) |
| LOC110511048 | LOC106603033 | other | upstream | 1524708 | 47132135 ~ 47151549 (+) |
| LOC110534184 | LOC106563731 | other | downstream | 600637 | 49277626 ~ 49282746 (+) |
| LOC110534189 | LOC106602925 | other | downstream | 753334 | 49426785 ~ 49432958 (+) |
| G898894 | LOC106603005 | other | downstream | 1357925 | 50034990 ~ 50037685 (+) |
| G901849 | LOC106602874 | other | downstream | 3773153 | 52450218 ~ 52475365 (+) |
| LOC110534253 | hinfp | other | downstream | 3855663 | 52532434 ~ 52542498 (+) |
