XLOC_002799 (trim3b)


Basic Information

Item Value
gene id XLOC_002799
gene name trim3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 26129830 ~ 26179805 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005181
TGAAAATactctttctctgttaaacatcacaaaaaaaataaaatttaattgtatCTTCAACTTTTTTACTCTGAAGTACAGGAATATTATGTCAAACATTTTAGTTACTTAAagaattaaaacacactttacttgCAATCAATATGCttttcaaaattattaatatCCATTTCAAAATCATGTTTCGACACATTTGTAAATGAAAACAACAAATAACAGCAGTGTCTGtaatccagctgcaaccctttcagagaaagtgagagagattCCTCTGTATCTATAGGATGTATTTTCTCTCTCCCATTTTCCTTTAGCCTTGCGTCTTTATTGGCTGAGCTCATCCCCACCTCTCTTCCTCTCAGCCAATTGCCTTCCACTATCCTCCCTTCCCCTCCTCCttcatcctcacacacacacacaatatacaatGCTCACACCCTTCTGCTGCTTCTGCTTCTTTCCTGTCTGCTTCTCTTTCTCCTGCTTTCTGGACTTTATCCTCaccgtttcttcttcttctcctttgCGATGAGGGTCTTTAAAGTGGGATAGGTCCGGATGCATCGCTGAGACCTGTCCGTGTTTTTCCTCTTTCCATTTTTTTCATCCCTGTATCTCACgTTAAGGTTTGTCCTGGCCCTCGGCCACGTCTTTGGATGTCTGTCACAATGGCAAAGTTTGAGACCGGCCGCACAAGCCCAGTGGTCCGTCAGATAGACAAGCAGTTCCTGGTGTGCAGTATCTGTCTGGACCACTACCACAATCCCAAAGTCCTGCCCTGCCTGCACACCTTCTGCGAAAGGTGCCTACAGAACTACATTCCCCCTCAGTCCCTGACACTGTCCTGCCCCGTGTGCAGACAGACCTCTATTTTGCCTGAAAAAGGTGTAGCAGCACTCCAGAACAACTTCTTTATCACAAACCTTATGGAGGTGCTGCAGAGAGACTCTGAATGCTCTCGTCCTGAGGCCTGCAGCGTGCTGGAGTCTGTCAGCGCAGCCGCCGCTGGGAAACCACTCTCCTGCCCCAATCATGAGGGCAAGGTGATGGAGTTTTACTGCGAGTCGTGTGAGACTGCCATGTGTCTGGAATGCACAGAAGGGGAGCACCGGGAGCATGTGACTGTTCCACTGCGGGACGTCCTAGAGCAGCACAAAGCAGTGCTGAAGAACCAGCTGGATGCCATCCGCAACAGACTTCCTCAGCTAACAGCCGCCATCGAGATGGTGAATGAAATCTCTAAACAGCTGACAGAGAGGAAGAATGAAGCCGTCAATGAGATCAACATGACATTTGAGGAGCTGGAGAGGGCTTTACACCAACGAAAGGCTGCACTCATCACAGACCTGGAGAACATCTGTAGCACCAAGCAGAAGGTTCTTCAGGCGCAGTTATCGTCACTCCTGCAGGGAAAGGAGCACATCCAGAGCAGCTGCAGTTTCACCGAACAGGCATTGAGCCACGGCAGCGCTACTGAAGTCCTGCTGGTCCAGAAGCAGATGAGCGAGCGGGTGAGTGCTCTCGCCTGCCATGACTTCCCAGAACGCCCACATGAAAATGCCCACCTGGACTGCCAGATTGAGACTGAGGGCCTGCGACGCTCCATACAGAACCTGGGCGTCCTGCTGACAACGGGGGCTGTGGGACATACGAGCGTGGCCACCGGAGAGGGACTCAGACACGCTCTGGTCGGCCAGCATGTGACTGTGACCGTCACCACTAAAGATAAAGACAGCGAGCTCGTCAGGACGGGTAATGCGGCTCTCCGAGCAGAGATCATGGGGCAGGATGGAGCGCAAGTGACTGAGGCGGAGGTGGTGGATAATAAGAACGGGACGTACGAGGTTGGTTATACACTGAAGGGTGAAGGCGAGTACTTGTTCTCTCTGATACTGTATGGACAGCCGGTGAGGGGCAGCCCGTTCAAATTAAGGGCCATAAAGCCATCGGATGTGCCTCAGTCTCCGGATGACGTGAAGAGGAGGGTTAAATCTCCAAGTGGGACAGGTGGACACATCAGACAGAAGGCTGTCAGGAGACCCTCCAGCATGTACAGCACCACCAAAAAGAAGGAAAACCCCATTGAGgatgagttgatttaccgagtgGGCACTCGGGGCAGAGAGAAGGGTGAGTTCACCAATCTACAGGGCATCTCTGCTTCCATCAGTGGCAGAGTCATTGTAGCAGACAGCAACAACCAGTGCATTCAGGTTTTTACCAATGATGGGCAGTTTAAAGCTCGTTTCGGGGTGCGTGGTCGTTCTCCAGGACAACTGCAGAGGCCCACCGGTGTGGCAGTCGACACCAACGGAGACGTTATAGTGGCTGATTATGATAACAGATGGATCAGTATCTTCTCCCCTGATGGGAAGTTCAAGAATAAGATTGGTGCTGGTCGTCTGATGGGTCCCAAAGGAGTGGCTGTAGACAGAAACGGTCATATCATCGCAGTGGACAATAAAGCCTGCTGTGTGTTCATCTTTCAGTCCAATGGCAAACTAGTGACCAAGTTTGGAGCGAGGGGGACTTCAGACAGACAGTTTGCAGAAAAAAGTGGTTCAAAGTGTGCACTGGAGCAAAAGTTTAGTAAATCTGGCCCTGGGTTCAGCCCACACTTTGTTGCTGTCAACAACAAGAATGAAATTGTGGTGACAGACTTTCATAATCACTCCGTCAAGGTTTACAGTGCAGATGGGGAGTTTTTGTTTAAGTTTGGGTCTCACGGAGAGGGAAATGGACAGTTTAATGCCCCCACAGGGGTCGCAGTGGATGTGAATGGTAACATTATTGTAGCAGACTGGGGCAACAGCAGAATACAGGTGTTTGACAGCGCAGGCTCATTCCTGTCCTACATCAACACCAGCGCTGACCCTCTGTACGGCCCGCAGGGTCTCGCTTTGACCTCCGATGGACACGTTGTTGTGGCTGATTCTGGAAACCACTGTTTCAAAGTCTACCGGTATCTGCAGTAAAACCACAAAAAACTCTTCATCCATCACCGTTTGCATAGATTTTATATCAGCATGATCCTCCAGAGAGGACAAATCGAGCAAacaaaaagcacttttttttctttaatcgtCTACTGATCTTCATGATCCAAAATCAAGAACTGCTTCTGTACTAAACCAGGAATGTTTATTGTAAATAACAGAAACCATATCAATAAGCACAGATTCTTATTAGAAACCATGTAAgttgtgtataaataaattataatatatctatatctatatatatatatatatatatatatataaagcattttGTGAATTGCCATCCAAAACACATAcagaaatgttaattatttttaaaattcctCGCCTGCCTTATAATTTTATACCATTTTTGCCACGGGATTGATAAATTAAAAAAGTCATTTCTtaaaattttgactttatttattacagttttaagtCTGTGTCTCACAATTCTGAGTGAAAGTGAAAACTAGGACCTTACTTTGCAAAAAGGTGTGAATTTAGGGTTACTAGTTTGAAACTAGTTTGACTAGGGTACTAGTTTTATTTTTGAggaaatattttgtcaaatattcTGAGAAAAAGTCTAATAATTGCATTATATAAAGTGTATGACATGGCACgctaatttctttttttgtggTATAAGCTAACACAATAaattaacatacatttaaaaaaaagaatttgaaAAGATGATCAGTTTGCTTCATTTATTGCAACtcaatttttctatttttacttTCTTTCTGAGATTGTGAAATATTGTGAGAAGGTCAGAATTTTGAGTTTAAAAATCCCAACTTTTTATTCCGTGGCAAAAACGGGCATCCATATCAACCTTGCCATGACTGCAACACttgtgtattttaataataacaacattctgcatttgtaaatatacaaaatagTGTACATATGAAGATATTGGGTGTATGTAACgtaaatgacacaggcttcttgTATTGTCCGATGACAGCGTCTAGCGATCAGATCATTCAGAGCTGATCATCTCTCACACAAAAATATCAAAGCAGTAAACAAAAGGACATATTTTTTCCAttccaaattatttatttttctaaagcaCAAAGGCTACTTTACGTGTCGAAGAATCTAACGTGTTGATGAAATGTAATCAAACCCAAGTATTTCAAATATATTGCCTCTGATTTTTAACGTTCTAGAAAGAAGATCAGCTATATCTCCTCTTTGTAAATAACACATTGTGTTTACAGCGTAGCAACCAATTGTTGTCTTTAGTCAGTATTATAGTTTATGGTTCGTTTGtctatttatttcatgttttgtacACGTTTTCCTGAATAATTCATCATCACCAGCGAATGATTTCAGAGTCCACTTCCTTTCGTTTTGTGGAAATTTCCGTTGTCTTTTTTTTATGTGACGTCATGCTACTGGATGTGATCCTCTACAAGGTTATTGAACGGTGGCTCAGAGCTGAAACAGTAAacgtatttattaatatttgtgcgGAGAACATTTTTGCATGTTAATGATTTCGGCAGTATGAATATGGTTTTCTGCAACAGCGAGATAAACTGTAACGATTTGCTATTTCCAGACCGGGAATTAAAAAgatgtaataaacaaattaaatattgtcCTTTTTTTCCACTCATGAATtggtaaataaaacaacacacagcAATGAAGTTCTAGTATAACAAGAAAAttgactaaatgactaaatattttaattatcttttttaaaaTCAAGTTTATCCAGactagttttaaaaatattattataataataaaacaattatataagGGCCCATTGTGAGTGACACAGGTGTCACAGACAGTGGTGCAGGTCTGAAAAGATCTTTTTTATGCATTATCCATCACTTTCAAGTCCTTTTGTGACATTTAATGAGCACCCAGGTTCATTCTTATGTCGTCAAGTGCTTTTTTTGTTGCCTTGGAAACATTTACAAAATGGTGGTCCATCTGGATTGCTCGTTGCTgagacaggaaaaaaaaaaacgtttgtgtTTGTTACTAAAGGTAAGTTTTTGTAGCGATCACAGTTTTAGGTTTGAAGTATGTTgctgcaaaaaataaactatgGAAGCCTGTTTCGttcatgaaataaaatattaatttgcaaGCCAACTTACTTTCTCGTAAGTCATATTTTGACTTTACgtctcataataatgacaaagtgTCTTATAATAATGGCTTATGTTCTTGTATTAATGACTTTCTCATGATAATGAGATATTTTCCTGTAAAAATGACTTAACATCTCATAAAAATGAGAAACTTTGACTTATTAATATGAGAAAGTCATAATTTAGAGAAAATTAGATATTTCATAATAACTTTCTCATATTGAGATATttcataaaaatgacattttctctTAATAATGACTTACAGTCTCATAATAATTACTTTCTCATAATAAAGAGATGTTATCTCATATAGTAATGACTTGCCTTCTCATCAGCTTTCtcataataatgaaatattatcTTATAGTAATGACTTATAATAATGAGATGTTTTCTTTAATTATGACTTTCCCATAACAATGACTCTTATTATAACGTGTTTCCCAAAATGAGATATTATATCGTATTAATGACTCCTTATGACTTTCTCATATCTTATAATAATGA
>TCONS_00005182
CGCAGAGGCGAGTGGACTGTGTACGTTGTGTGTTGTTCATTTGGGGAGGGGGGCTGGAGACTGAGGGAACGGGTTCTGCTGTGCTCTTCAGACACCAGGCCCTGCTGAAAACTACACGAAACAACAATGGAGCCTGCCTGAGACAGTCCACTTGTATGTgTTAAGGTTTGTCCTGGCCCTCGGCCACGTCTTTGGATGTCTGTCACAATGGCAAAGTTTGAGACCGGCCGCACAAGCCCAGTGGTCCGTCAGATAGACAAGCAGTTCCTGGTGTGCAGTATCTGTCTGGACCACTACCACAATCCCAAAGTCCTGCCCTGCCTGCACACCTTCTGCGAAAGGTGCCTACAGAACTACATTCCCCCTCAGTCCCTGACACTGTCCTGCCCCGTGTGCAGACAGACCTCTATTTTGCCTGAAAAAGGTGTAGCAGCACTCCAGAACAACTTCTTTATCACAAACCTTATGGAGGTGCTGCAGAGAGACTCTGAATGCTCTCGTCCTGAGGCCTGCAGCGTGCTGGAGTCTGTCAGCGCAGCCGCCGCTGGGAAACCACTCTCCTGCCCCAATCATGAGGGCAAGGTGATGGAGTTTTACTGCGAGTCGTGTGAGACTGCCATGTGTCTGGAATGCACAGAAGGGGAGCACCGGGAGCATGTGACTGTTCCACTGCGGGACGTCCTAGAGCAGCACAAAGCAGTGCTGAAGAACCAGCTGGATGCCATCCGCAACAGACTTCCTCAGCTAACAGCCGCCATCGAGATGGTGAATGAAATCTCTAAACAGCTGACAGAGAGGAAGAATGAAGCCGTCAATGAGATCAACATGACATTTGAGGAGCTGGAGAGGGCTTTACACCAACGAAAGGCTGCACTCATCACAGACCTGGAGAACATCTGTAGCACCAAGCAGAAGGTTCTTCAGGCGCAGTTATCGTCACTCCTGCAGGGAAAGGAGCACATCCAGAGCAGCTGCAGTTTCACCGAACAGGCATTGAGCCACGGCAGCGCTACTGAAGTCCTGCTGGTCCAGAAGCAGATGAGCGAGCGGGTGAGTGCTCTCGCCTGCCATGACTTCCCAGAACGCCCACATGAAAATGCCCACCTGGACTGCCAGATTGAGACTGAGGGCCTGCGACGCTCCATACAGAACCTGGGCGTCCTGCTGACAACGGGGGCTGTGGGACATACGAGCGTGGCCACCGGAGAGGGACTCAGACACGCTCTGGTCGGCCAGCATGTGACTGTGACCGTCACCACTAAAGATAAAGACAGCGAGCTCGTCAGGACGGGTAATGCGGCTCTCCGAGCAGAGATCATGGGGCAGGATGGAGCGCAAGTGACTGAGGCGGAGGTGGTGGATAATAAGAACGGGACGTACGAGGTTGGTTATACACTGAAGGGTGAAGGCGAGTACTTGTTCTCTCTGATACTGTATGGACAGCCGGTGAGGGGCAGCCCGTTCAAATTAAGGGCCATAAAGCCATCGGATGTGCCTCAGTCTCCGGATGACGTGAAGAGGAGGGTTAAATCTCCAAGTGGGACAGGTGGACACATCAGACAGAAGGCTGTCAGGAGACCCTCCAGCATGTACAGCACCACCAAAAAGAAGGAAAACCCCATTGAGgatgagttgatttaccgagtgGGCACTCGGGGCAGAGAGAAGGGTGAGTTCACCAATCTACAGGGCATCTCTGCTTCCATCAGTGGCAGAGTCATTGTAGCAGACAGCAACAACCAGTGCATTCAGGTTTTTACCAATGATGGGCAGTTTAAAGCTCGTTTCGGGGTGCGTGGTCGTTCTCCAGGACAACTGCAGAGGCCCACCGGTGTGGCAGTCGACACCAACGGAGACGTTATAGTGGCTGATTATGATAACAGATGGATCAGTATCTTCTCCCCTGATGGGAAGTTCAAGAATAAGATTGGTGCTGGTCGTCTGATGGGTCCCAAAGGAGTGGCTGTAGACAGAAACGGTCATATCATCGCAGTGGACAATAAAGCCTGCTGTGTGTTCATCTTTCAGTCCAATGGCAAACTAGTGACCAAGTTTGGAGCGAGGGGGACTTCAGACAGACAGTTTGCAGGCCCACACTTTGTTGCTGTCAACAACAAGAATGAAATTGTGGTGACAGACTTTCATAATCACTCCGTCAAGGTTTACAGTGCAGATGGGGAGTTTTTGTTTAAGTTTGGGTCTCACGGAGAGGGAAATGGACAGTTTAATGCCCCCACAGGGGTCGCAGTGGATGTGAATGGTAACATTATTGTAGCAGACTGGGGCAACAGCAGAATACAGGTGTTTGACAGCGCAGGCTCATTCCTGTCCTACATCAACACCAGCGCTGACCCTCTGTACGGCCCGCAGGGTCTCGCTTTGACCTCCGATGGACACGTTGTTGTGGCTGATTCTGGAAACCACTGTTTCAAAGTCTACCGGTATCTGCAGTAAAACCACAAAAAACTCTTCATCCATCACCGTTTGCATAGATTTTATATCAGCATGATCCTCCAGAGAGGACAAATCGAGCAAacaaaaagcacttttttttctttaatcgtCTACTGATCTTCATGATCCAAAATCAAGAACTGCTTCTGTACTAAACCAGGAATGTTTATTGTAAATAACAGAAACCATATCAATAAGCACAGATTCTTATTAGAAACCATGTAAgttgtgtataaataaattataatatatctatatctatatatatatatatatatatatatataaagcattttGTGAATTGCCATCCAAAACACATAcagaaatgttaattatttttaaaattcctCGCCTGCCTTATAATTTTATACCATTTTTGCCACGGGATTGATAAATTAAAAAAGTCATTTCTtaaaattttgactttatttattacagttttaagtCTGTGTCTCACAATTCTGAGTGAAAGTGAAAACTAGGACCTTACTTTGCAAAAAGGTGTGAATTTAGGGTTACTAGTTTGAAACTAGTTTGACTAGGGTACTAGTTTTATTTTTGAggaaatattttgtcaaatattcTGAGAAAAAGTCTAATAATTGCATTATATAAAGTGTATGACATGGCACgctaatttctttttttgtggTATAAGCTAACACAATAaattaacatacatttaaaaaaaagaatttgaaAAGATGATCAGTTTGCTTCATTTATTGCAACtcaatttttctatttttacttTCTTTCTGAGATTGTGAAATATTGTGAGAAGGTCAGAATTTTGAGTTTAAAAATCCCAACTTTTTATTCCGTGGCAAAAACGGGCATCCATATCAACCTTGCCATGACTGCAACACttgtgtattttaataataacaacattctgcatttgtaaatatacaaaatagTGTACATATGAAGATATTGGGTGTATGTAACgtaaatgacacaggcttcttgTATTGTCCGATGACAGCGTCTAGCGATCAGATCATTCAGAGCTGATCATCTCTCACACAAAAATATCAAAGCAGTAAACAAAAGGACATATTTTTTCCAttccaaattatttatttttctaaagcaCAAAGGCTACTTTACGTGTCGAAGAATCTAACGTGTTGATGAAATGTAATCAAACCCAAGTATTTCAAATATATTGCCTCTGATTTTTAACGTTCTAGAAAGAAGATCAGCTATATCTCCTCTTTGTAAATAACACATTGTGTTTACAGCGTAGCAACCAATTGTTGTCTTTAGTCAGTATTATAGTTTATGGTTCGTTTGtctatttatttcatgttttgtacACGTTTTCCTGAATAATTCATCATCACCAGCGAATGATTTCAGAGTCCACTTCCTTTCGTTTTGTGGAAATTTCCGTTGTCTTTTTTTTATGTGACGTCATGCTACTGGATGTGATCCTCTACAAGGTTATTGAACGGTGGCTCAGAGCTGAAACAGTAAacgtatttattaatatttgtgcgGAGAACATTTTTGCATGTTAATGATTTCGGCAGTATGAATATGGTTTTCTGCAACAGCGAGATAAACTGTAACGATTTGCTATTTCCAGACCGGGAATTAAAAAgatgtaataaacaaattaaatattg
>TCONS_00005183
GATCAGTATCTTCTCCCCTGATGGGAAGTTCAAGAATAAGATTGGTGCTGGTCGTCTGATGGGTCCCAAAGGAGTGGCTGTAGACAGAAACGGTCATATCATCGCAGTGGACAATAAAGCCTGCTGTGTGTTCATCTTTCAGTCCAATGGCAAACTAGTGACCAAGTTTGGAGCGAGGGGGACTTCAGACAGACAGTTTGCAGAAAAAAGTGGTTCAAAGTGTGCACTGGAGCAAAAGTTTAGTAAATCTGGCCCTGGGTTCAGCCCACACTTTGTTGCTGTCAACAACAAGAATGAAATTGTGGTGACAGACTTTCATAATCACTCCGTCAAGGTTTACAGTGCAGATGGGGAGTTTTTGTTTAAGTTTGGGTCTCACGGAGAGGGAAATGGACAGTTTAATGCCCCCACAGGGGTCGCAGTGGATGTGAATGGTAACATTATTGTAGCAGACTGGGGCAACAGCAGAATACAGGTGTTTGACAGCGCAGGCTCATTCCTGTCCTACATCAACACCAGCGCTGACCCTCTGTACGGCCCGCAGGGTCTCGCTTTGACCTCCGATGGACACGTTGTTGTGGCTGATTCTGGAAACCACTGTTTCAAAGTCTACCGGTATCTGCAGTAAAACCACAAAAAACTCTTCATC
>TCONS_00006054
aaaaataatcatttttatcgGTAGTTAGTCATAATATAGCTGTAAAACAGCTCTTTATTTAACAATGTTCTTGTTGTAAATGCTAAATTTGCTTAATACAGCAATAACAGTACATTATGTATAATTGCATGGATCTAACCTTAAACCAAATCTTTAACTGTAAACTTAACCTTATATTACATGTTCTTGGTTATTATTACTCAGTACTTCAAAGTATAATTACCCTATAACAAggacacattaaaaataaagttcaaCTGACaggagtaatttttttattttattgtttttttctattttgatcTGTTGTTAAATGCTGTGTTGATGTTTAATGTTCTGTTTTATGACCCATTAGGCACTCGGGGCAGAGAGAAGGGTGAGTTCACCAATCTACAGGGCATCTCTGCTTCCATCAGTGGCAGAGTCATTGTAGCAGACAGCAACAACCAGTGCATTCAGGTTTTTACCAATGATGGGCAGTTTAAAGCTCGTTTCGGGGTGCGTGGTCGTTCTCCAGGACAACTGCAGAGGCCCACCGGTGTGGCAGTCGACACCAACGGAGACGTTATAGTGGCTGATTATGATAACAGATGGATCAGTATCTTCTCCCCTGATGGGAAGTTCAAGAATAAGATTGGTGCTGGTCGTCTGATGGGTCCCAAAGGAGTGGCTGTAGACAGAAACGGTCATATCATCGCAGTGGACAATAAAGCCTGCTGTGTGTTCATCTTTCAGTCCAATGGCAAACTAGTGACCAAGTTTGGAGCGAGGGGGACTTCAGACAGACAGTTTGCAGAAAAAAGTGGTTCAAAGTGTGCACTGGAGCAAAAGTTTAGTAAATCTGGCCCTGGGTTCAGCCCACACTTTGTTGCTGTCAACAACAAGAATGAAATTGTGGTGACAGACTTTCATAATCACTCCGTCAAGGTTTACAGTGCAGATGGGGAGTTTTTGTTTAAGTTTGGGTCTCACGGAGAGGGAAATGGACAGTTTAATGCCCCCACAGGGGTCGCAGTGGATGTGAATGGTAACATTATTGTAGCAGACTGGGGCAACAGCAGAATACAGGTGTTTGACAGCGCAGGCTCATTCCTGTCCTACATCAACACCAGCGCTGACCCTCTGTACGGCCCGCAGGGTCTCGCTTTGACCTCCGATGGACACGTTGTTGTGGCTGATTCTGGAAACCACTGTTTCAAAGTCTACCGGTATCTGCAGTAAAACCACAAAAAACTCTTCATC
>TCONS_00005184
aaaaataatcatttttatcgGTAGTTAGTCATAATATAGCTGTAAAACAGCTCTTTATTTAACAATGTTCTTGTTGTAAATGCTAAATTTGCTTAATACAGCAATAACAGTACATTATGTATAATTGCATGGATCTAACCTTAAACCAAATCTTTAACTGTAAACTTAACCTTATATTACATGTTCTTGGTTATTATTACTCAGTACTTCAAAGTATAATTACCCTATAACAAggacacattaaaaataaagttcaaCTGACaggagtaatttttttattttattgtttttttctattttgatcTGTTGTTAAATGCTGTGTTGATGTTTAATGTTCTGTTTTATGACCCATTAGGCACTCGGGGCAGAGAGAAGGGTGAGTTCACCAATCTACAGGGCATCTCTGCTTCCATCAGTGGCAGAGTCATTGTAGCAGACAGCAACAACCAGTGCATTCAGGTTTTTACCAATGATGGGCAGTTTAAAGCTCGTTTCGGGGTGCGTGGTCGTTCTCCAGGACAACTGCAGAGGCCCACCGGTGTGGCAGTCGACACCAACGGAGACGTTATAGTGGCTGATTATGATAACAGATGGATCAGTATCTT

Function

symbol description
trim3b Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Predicted to be located in cytoplasm. Orthologous to human TRIM3 (tripartite motif containing 3).

GO:

id name namespace
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process biological_process
GO:0000209 protein polyubiquitination biological_process
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0061630 ubiquitin protein ligase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070112-1132 Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Predicted to be located in cytoplasm. Orthologous to human TRIM3 (tripartite motif containing 3).

Ensembl:

ensembl_id ENSDARG00000005397

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005181 False 5635 mRNA 0.40 13 26129830 26179805
TCONS_00005182 False 4088 mRNA 0.44 12 26130856 26163989
TCONS_00005183 False 649 processed_transcript 0.48 6 26132469 26141081
TCONS_00006054 False 1242 lncRNA 0.42 7 26132469 26142597
TCONS_00005184 True 605 lncRNA 0.36 2 26141070 26142597

Neighbor

gene id symbol gene type direction distance location
XLOC_002798 trpc4a coding downstream 269728 25829262 ~ 25860102 (-)
XLOC_002797 ftr54 coding downstream 306572 25819996 ~ 25823258 (-)
XLOC_002796 postna coding downstream 311976 25770467 ~ 25817854 (-)
XLOC_002795 postna coding downstream 360496 25762196 ~ 25769334 (-)
XLOC_002794 sod1 coding downstream 412877 25694395 ~ 25716953 (-)
XLOC_002800 fhdc3 coding upstream 11002 26190807 ~ 26226228 (-)
XLOC_002801 dchs1b coding upstream 88985 26268790 ~ 26430168 (-)
XLOC_002802 NA coding upstream 261247 26441052 ~ 26447171 (-)
XLOC_002803 SLC46A3 coding upstream 322529 26502334 ~ 26512993 (-)
XLOC_002804 fgf13b coding upstream 536557 26716362 ~ 26744166 (-)
XLOC_002793 NA non-coding downstream 438160 25690872 ~ 25691670 (-)
XLOC_002792 NA non-coding downstream 442612 25686901 ~ 25687218 (-)
XLOC_002790 NA non-coding downstream 630356 25494173 ~ 25499474 (-)
XLOC_002788 NA non-coding downstream 739157 25380998 ~ 25390673 (-)
XLOC_002779 NA non-coding downstream 1277305 24833696 ~ 24852525 (-)
XLOC_002807 NA non-coding upstream 657031 26836836 ~ 26872413 (-)
XLOC_002808 CR545465.2 non-coding upstream 712762 26892567 ~ 26895076 (-)
XLOC_002809 NA non-coding upstream 721467 26901272 ~ 26902305 (-)
XLOC_002813 NA non-coding upstream 820757 27000562 ~ 27002614 (-)

Expression


Co-expression Network