G897689


Basic Information

Item Value
gene id G897689
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 49000152 ~ 49000627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1021295
ccagaaacgctggcgaatggaagcaagcgtaccccgaacgccagggtggccggctaacttggcagagtgagcccactgaagaacggccagacgagtaggaacgggaacgaaaagaaggttcctaggacaagcgcgcggtgacggagtttgagtgagtgcttgctttacctgcctctcaattccccagacagtcaacccgacaacacgcccctcagggagaatcccctcggggtcagtggaggctactgaagaactgaagagacgagtcaaagcatcaggcttggtgttcttagagcccggacgataagaaatcacgaactcgaaacgagcgaaaaacagcgcccaacgcgcctgacgcgcattaagtcgtttggcagaacggatgtactcaaggttcctatggtcagtccaaacgacaaaaggaacggtcgccccctccaaccactgtcgccattcgcctagggctaaccggatgg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1021295 True 476 lncRNA 0.56 1 49000152 49000627

Neighbor

gene id symbol gene type direction distance location
LOC110534176 LOC106602937 coding upstream 6219 48988339 ~ 48993933 (+)
LOC110534174 LOC106602938 coding upstream 19624 48979532 ~ 48980528 (+)
LOC110534173 LOC106602939 coding upstream 45019 48945663 ~ 48955133 (+)
rtn3 rtn3 coding upstream 72887 48911386 ~ 48927265 (+)
LOC110534170 frmd7 coding upstream 144220 48840604 ~ 48855932 (+)
LOC110534177 LOC106602935 coding downstream 28936 49029563 ~ 49103820 (+)
LOC110534178 LOC100380851 coding downstream 160003 49160630 ~ 49181760 (+)
LOC110534179 LOC106602933 coding downstream 189316 49189943 ~ 49212130 (+)
LOC110534180 LOC106602932 coding downstream 217572 49218199 ~ 49226581 (+)
LOC110534184 LOC106563731 coding downstream 276999 49277626 ~ 49282746 (+)
G897362 NA non-coding upstream 35980 48937638 ~ 48964172 (+)
G897337 NA non-coding upstream 119012 48880864 ~ 48881140 (+)
G897336 NA non-coding upstream 119389 48880547 ~ 48880763 (+)
LOC118936702 NA non-coding upstream 161473 48837072 ~ 48838821 (+)
G897237 NA non-coding upstream 332045 48666776 ~ 48668107 (+)
G897690 NA non-coding downstream 2403 49003030 ~ 49003245 (+)
G897764 NA non-coding downstream 112694 49113321 ~ 49115378 (+)
G897776 NA non-coding downstream 131233 49131860 ~ 49132088 (+)
G897778 NA non-coding downstream 134734 49135361 ~ 49135561 (+)
G897780 NA non-coding downstream 137638 49138265 ~ 49140071 (+)
G897244 dach2 other upstream 323087 48676257 ~ 48677065 (+)
G896217 NA other upstream 764536 48235182 ~ 48235616 (+)
G896043 NA other upstream 1089177 47909716 ~ 47910975 (+)
G895658 LOC106603032 other upstream 1783081 47216407 ~ 47217071 (+)
G895652 LOC106603032 other upstream 1795310 47202925 ~ 47204842 (+)
LOC110534189 LOC106602925 other downstream 429772 49426785 ~ 49432958 (+)
G898894 LOC106603005 other downstream 1034363 50034990 ~ 50037685 (+)
G901849 LOC106602874 other downstream 3449591 52450218 ~ 52475365 (+)
LOC110534253 hinfp other downstream 3532101 52532434 ~ 52542498 (+)

Expression


Co-expression Network