Gene
RNA
| Item | Value |
|---|---|
| gene id | G898045 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 49184435 ~ 49184838 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1021692 | True | 404 | lncRNA | 0.48 | 1 | 49184435 | 49184838 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534172 | LOC106602940 | coding | downstream | 276462 | 48881449 ~ 48907973 (-) |
| LOC110534171 | LOC106602941 | coding | downstream | 306558 | 48854852 ~ 48877877 (-) |
| dacha | dach2 | coding | downstream | 389115 | 48666706 ~ 48795320 (-) |
| alg13 | LOC106602945 | coding | downstream | 549833 | 48626002 ~ 48634602 (-) |
| LOC110534163 | atg4a | coding | downstream | 639497 | 48536413 ~ 48544938 (-) |
| LOC110534182 | LOC106602929 | coding | upstream | 58318 | 49243156 ~ 49275989 (-) |
| LOC110534186 | LOC100194652 | coding | upstream | 117579 | 49302417 ~ 49309197 (-) |
| LOC110534187 | NA | coding | upstream | 128572 | 49313410 ~ 49318075 (-) |
| LOC110534188 | LOC106602927 | coding | upstream | 133760 | 49318598 ~ 49425142 (-) |
| LOC110533138 | NA | coding | upstream | 253206 | 49438004 ~ 49443736 (-) |
| G898077 | LOC100380851 | non-coding | downstream | 9518 | 49173319 ~ 49174917 (-) |
| G898061 | NA | non-coding | downstream | 25073 | 49159141 ~ 49159362 (-) |
| G898051 | NA | non-coding | downstream | 34808 | 49149408 ~ 49149627 (-) |
| G898032 | NA | non-coding | downstream | 62561 | 49121485 ~ 49121874 (-) |
| G898012 | LOC106602935 | non-coding | downstream | 80617 | 49100638 ~ 49103818 (-) |
| G898107 | NA | non-coding | upstream | 91395 | 49276233 ~ 49276463 (-) |
| G898114 | NA | non-coding | upstream | 97176 | 49282014 ~ 49283140 (-) |
| G898118 | NA | non-coding | upstream | 102893 | 49287731 ~ 49287964 (-) |
| G898119 | NA | non-coding | upstream | 104120 | 49288958 ~ 49289477 (-) |
| G898122 | NA | non-coding | upstream | 107732 | 49292570 ~ 49292890 (-) |
| G896841 | NA | other | downstream | 1195359 | 47987761 ~ 47989076 (-) |
| LOC110534118 | LOC106603020 | other | downstream | 1951389 | 47203241 ~ 47234608 (-) |
| G894917 | NA | other | downstream | 3266096 | 45917279 ~ 45918339 (-) |
| LOC110534046 | LOC107567170 | other | downstream | 3434104 | 45747090 ~ 45751405 (-) |
| G899409 | NA | other | upstream | 971354 | 50156192 ~ 50156902 (-) |
| G899421 | NA | other | upstream | 997558 | 50182396 ~ 50182788 (-) |
| LOC110534220 | LOC106602898 | other | upstream | 1280629 | 50463950 ~ 50482534 (-) |
| G899727 | NA | other | upstream | 1536148 | 50720986 ~ 50721603 (-) |
| G899739 | LOC106602890 | other | upstream | 1558320 | 50743158 ~ 50750233 (-) |
