G897901


Basic Information

Item Value
gene id G897901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 49365005 ~ 49365204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1021533
TGAAAAACTAAATGAAATCCCTAGGTTCTTACACCGTTGTCCTCACTTGCTTATTAATTGGCAATAAAAGTCAGCCACAAACACAACGCTGTTTAACTGCCTTCAATGCAGCCATTCGTTTAACGCAGTCACTATTCTTGCTTGCTAAATACTGCAATTTCTTATTTTTATGCACAGATTGAGGCTGTTCTAAAAAGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1021533 True 200 lncRNA 0.38 1 49365005 49365204

Neighbor

gene id symbol gene type direction distance location
LOC110534184 LOC106563731 coding upstream 82259 49277626 ~ 49282746 (+)
LOC110534180 LOC106602932 coding upstream 138424 49218199 ~ 49226581 (+)
LOC110534179 LOC106602933 coding upstream 152875 49189943 ~ 49212130 (+)
LOC110534178 LOC100380851 coding upstream 183245 49160630 ~ 49181760 (+)
LOC110534177 LOC106602935 coding upstream 261185 49029563 ~ 49103820 (+)
LOC110534189 LOC106602925 coding downstream 61581 49426785 ~ 49432958 (+)
rgs14b LOC106602924 coding downstream 85664 49450868 ~ 49472529 (+)
cnot6a LOC106602922 coding downstream 240029 49605233 ~ 49618387 (+)
LOC110533139 LOC106602921 coding downstream 295676 49660880 ~ 49720570 (+)
LOC110534194 LOC106602920 coding downstream 360647 49725851 ~ 49730277 (+)
G897859 NA non-coding upstream 55096 49302351 ~ 49309909 (+)
G897864 NA non-coding upstream 63807 49300893 ~ 49301198 (+)
G897858 NA non-coding upstream 71051 49293748 ~ 49293954 (+)
G897857 NA non-coding upstream 71330 49293476 ~ 49293675 (+)
G897854 NA non-coding upstream 73349 49291399 ~ 49291656 (+)
G897903 NA non-coding downstream 719 49365923 ~ 49366603 (+)
G897907 NA non-coding downstream 10060 49375264 ~ 49375554 (+)
G897918 NA non-coding downstream 24549 49389753 ~ 49390175 (+)
G897919 NA non-coding downstream 25312 49390516 ~ 49391482 (+)
G897922 NA non-coding downstream 29283 49394487 ~ 49394724 (+)
G897244 dach2 other upstream 687940 48676257 ~ 48677065 (+)
G896217 NA other upstream 1129389 48235182 ~ 48235616 (+)
G896043 NA other upstream 1454030 47909716 ~ 47910975 (+)
G895658 LOC106603032 other upstream 2147934 47216407 ~ 47217071 (+)
G898894 LOC106603005 other downstream 669786 50034990 ~ 50037685 (+)
G901849 LOC106602874 other downstream 3085014 52450218 ~ 52475365 (+)
LOC110534253 hinfp other downstream 3167524 52532434 ~ 52542498 (+)
G902707 NA other downstream 4150903 53516107 ~ 53519788 (+)

Expression


Co-expression Network