Gene
RNA
| Item | Value |
|---|---|
| gene id | G897903 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 49365923 ~ 49366603 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1021535 | True | 681 | lncRNA | 0.39 | 1 | 49365923 | 49366603 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534184 | LOC106563731 | coding | upstream | 83177 | 49277626 ~ 49282746 (+) |
| LOC110534180 | LOC106602932 | coding | upstream | 139342 | 49218199 ~ 49226581 (+) |
| LOC110534179 | LOC106602933 | coding | upstream | 153793 | 49189943 ~ 49212130 (+) |
| LOC110534178 | LOC100380851 | coding | upstream | 184163 | 49160630 ~ 49181760 (+) |
| LOC110534177 | LOC106602935 | coding | upstream | 262103 | 49029563 ~ 49103820 (+) |
| LOC110534189 | LOC106602925 | coding | downstream | 60182 | 49426785 ~ 49432958 (+) |
| rgs14b | LOC106602924 | coding | downstream | 84265 | 49450868 ~ 49472529 (+) |
| cnot6a | LOC106602922 | coding | downstream | 238630 | 49605233 ~ 49618387 (+) |
| LOC110533139 | LOC106602921 | coding | downstream | 294277 | 49660880 ~ 49720570 (+) |
| LOC110534194 | LOC106602920 | coding | downstream | 359248 | 49725851 ~ 49730277 (+) |
| G897901 | NA | non-coding | upstream | 719 | 49365005 ~ 49365204 (+) |
| G897859 | NA | non-coding | upstream | 56014 | 49302351 ~ 49309909 (+) |
| G897864 | NA | non-coding | upstream | 64725 | 49300893 ~ 49301198 (+) |
| G897858 | NA | non-coding | upstream | 71969 | 49293748 ~ 49293954 (+) |
| G897857 | NA | non-coding | upstream | 72248 | 49293476 ~ 49293675 (+) |
| G897907 | NA | non-coding | downstream | 8661 | 49375264 ~ 49375554 (+) |
| G897918 | NA | non-coding | downstream | 23150 | 49389753 ~ 49390175 (+) |
| G897919 | NA | non-coding | downstream | 23913 | 49390516 ~ 49391482 (+) |
| G897922 | NA | non-coding | downstream | 27884 | 49394487 ~ 49394724 (+) |
| G897929 | NA | non-coding | downstream | 37856 | 49404459 ~ 49404682 (+) |
| G897244 | dach2 | other | upstream | 688858 | 48676257 ~ 48677065 (+) |
| G896217 | NA | other | upstream | 1130307 | 48235182 ~ 48235616 (+) |
| G896043 | NA | other | upstream | 1454948 | 47909716 ~ 47910975 (+) |
| G895658 | LOC106603032 | other | upstream | 2148852 | 47216407 ~ 47217071 (+) |
| G898894 | LOC106603005 | other | downstream | 668387 | 50034990 ~ 50037685 (+) |
| G901849 | LOC106602874 | other | downstream | 3083615 | 52450218 ~ 52475365 (+) |
| LOC110534253 | hinfp | other | downstream | 3166125 | 52532434 ~ 52542498 (+) |
| G902707 | NA | other | downstream | 4149504 | 53516107 ~ 53519788 (+) |
