G897944


Basic Information

Item Value
gene id G897944
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 49420717 ~ 49421068 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1021576
GTTTTGGTAAATTGTTTTGCTTTGGAAGGAAGCGTACTGCCAGAATGTATGGAATTGAGTTAAGCGGCAATGAGTATTGCATGAGTACAAATATAGTTTGGCCTACCGACCCAATAGTGGAATATCATGACTAGAGTACATCATCTTACCAGTACTACTTTTGTTCATTCATGGACCATGTAGAACACACCCTGATGCAAATAGCCTACTGTTCTACAGAGACAACCTGAATGGGAGAGGAGGTACTTAACTTGTATTCATCATATGTTCCAATAATTTGTAATATTAATGCACGATCAAACAATAGATGGCTTGATGAGCAACCAAGGTCATGCTTCACAGCCCCAGGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1021576 True 352 lncRNA 0.40 1 49420717 49421068

Neighbor

gene id symbol gene type direction distance location
LOC110534184 LOC106563731 coding upstream 137971 49277626 ~ 49282746 (+)
LOC110534180 LOC106602932 coding upstream 194136 49218199 ~ 49226581 (+)
LOC110534179 LOC106602933 coding upstream 208587 49189943 ~ 49212130 (+)
LOC110534178 LOC100380851 coding upstream 238957 49160630 ~ 49181760 (+)
LOC110534177 LOC106602935 coding upstream 316897 49029563 ~ 49103820 (+)
LOC110534189 LOC106602925 coding downstream 5717 49426785 ~ 49432958 (+)
rgs14b LOC106602924 coding downstream 29800 49450868 ~ 49472529 (+)
cnot6a LOC106602922 coding downstream 184165 49605233 ~ 49618387 (+)
LOC110533139 LOC106602921 coding downstream 239812 49660880 ~ 49720570 (+)
LOC110534194 LOC106602920 coding downstream 304783 49725851 ~ 49730277 (+)
G897941 NA non-coding upstream 3606 49416857 ~ 49417111 (+)
G897940 NA non-coding upstream 4330 49416187 ~ 49416387 (+)
G897936 NA non-coding upstream 8270 49412172 ~ 49412447 (+)
G897929 NA non-coding upstream 16035 49404459 ~ 49404682 (+)
G897922 NA non-coding upstream 25993 49394487 ~ 49394724 (+)
G898229 NA non-coding downstream 52617 49473685 ~ 49473905 (+)
G898231 NA non-coding downstream 54148 49475216 ~ 49475768 (+)
G898247 NA non-coding downstream 64105 49485173 ~ 49485391 (+)
G898267 NA non-coding downstream 86664 49507732 ~ 49507998 (+)
G898316 NA non-coding downstream 116404 49537472 ~ 49537967 (+)
G897244 dach2 other upstream 743652 48676257 ~ 48677065 (+)
G896217 NA other upstream 1185101 48235182 ~ 48235616 (+)
G896043 NA other upstream 1509742 47909716 ~ 47910975 (+)
G895658 LOC106603032 other upstream 2203646 47216407 ~ 47217071 (+)
G898894 LOC106603005 other downstream 613922 50034990 ~ 50037685 (+)
G901849 LOC106602874 other downstream 3029150 52450218 ~ 52475365 (+)
LOC110534253 hinfp other downstream 3111660 52532434 ~ 52542498 (+)
G902707 NA other downstream 4095039 53516107 ~ 53519788 (+)

Expression


Co-expression Network