G898316


Basic Information

Item Value
gene id G898316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 49537472 ~ 49537967 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1022011
ggtggtAAGTTTAATATAACAAATAACATGGCACGATACAACGTTGGAGTATCGTCTAGACATTAACAACAGAAGCAATagtgcctggggaaggaacctaagggataaaggggaggtaattagtaaggtaatggagtccaggtgtgcttaATGATGAAGCGCAGGTGTGCGTAGTGATGAAAGCCAGGTGCGCTTAATGATGGTTCCCAGGACCAGTGGTTGGTAAACCGGCGACGTCAAATgccggaggggaggagcgggagtagGTGTGACaacaatgaacacaattacattttatcgatggcaatttgaattcacaaaaatacagtaaCGAGATCCTGAGGCACATTGTGACGCccatttttttaaggtatctgtgaccatctgtattcccagtcatgcgaaatccatagattagggcctacttaaattatttcaattgactgatttcctcattcctcatatgaactgtaactcagtaaaatctttgaaattg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581772, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1022011 True 496 lncRNA 0.42 1 49537472 49537967

Neighbor

gene id symbol gene type direction distance location
rgs14b LOC106602924 coding upstream 64943 49450868 ~ 49472529 (+)
LOC110534189 LOC106602925 coding upstream 105612 49426785 ~ 49432958 (+)
LOC110534184 LOC106563731 coding upstream 254726 49277626 ~ 49282746 (+)
LOC110534180 LOC106602932 coding upstream 310891 49218199 ~ 49226581 (+)
LOC110534179 LOC106602933 coding upstream 325342 49189943 ~ 49212130 (+)
cnot6a LOC106602922 coding downstream 67266 49605233 ~ 49618387 (+)
LOC110533139 LOC106602921 coding downstream 122913 49660880 ~ 49720570 (+)
LOC110534194 LOC106602920 coding downstream 187884 49725851 ~ 49730277 (+)
LOC110534196 LOC106602919 coding downstream 207120 49745087 ~ 49753067 (+)
clk4b LOC106602917 coding downstream 262700 49800667 ~ 49810924 (+)
G898267 NA non-coding upstream 29474 49507732 ~ 49507998 (+)
G898247 NA non-coding upstream 52081 49485173 ~ 49485391 (+)
G898231 NA non-coding upstream 61704 49475216 ~ 49475768 (+)
G898229 NA non-coding upstream 63567 49473685 ~ 49473905 (+)
G897944 NA non-coding upstream 116404 49420717 ~ 49421068 (+)
G898318 NA non-coding downstream 2816 49540783 ~ 49541059 (+)
G898319 NA non-coding downstream 3317 49541284 ~ 49541692 (+)
G898353 NA non-coding downstream 31159 49569126 ~ 49569633 (+)
G898355 NA non-coding downstream 33098 49571065 ~ 49571312 (+)
G898368 NA non-coding downstream 41195 49579162 ~ 49579661 (+)
G897244 dach2 other upstream 860407 48676257 ~ 48677065 (+)
G896217 NA other upstream 1301856 48235182 ~ 48235616 (+)
G896043 NA other upstream 1626497 47909716 ~ 47910975 (+)
G898894 LOC106603005 other downstream 497023 50034990 ~ 50037685 (+)
G901849 LOC106602874 other downstream 2912251 52450218 ~ 52475365 (+)
LOC110534253 hinfp other downstream 2994761 52532434 ~ 52542498 (+)
G902707 NA other downstream 3978140 53516107 ~ 53519788 (+)
G902840 LOC106602714 other downstream 4132153 53670120 ~ 53674811 (+)

Expression


Co-expression Network