G898509


Basic Information

Item Value
gene id G898509
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 49713693 ~ 49714214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1022216
TTTGTAATGTTATCCGAAATGTTCCCCTAATGTTTGAGTGTCCAGTTTTCCCATAGTCAGGGGAACATTCTATCTATGTCAACCTTTTTTAGCATGTTTTGGTGTTGAAGTTacattcccttaatgtcaaacAGAACTTATCTAGAACGTGGTTATAATGTGCAAgtttaatgttctagacacgtttcatgggaacGCTGCAAGAACATTCCTGTGTCCTTTTCTCTGAGGTTTAGGAGAATATTCCAGCAACCATCCCAGCAAACATACATAGAACATAGTTACCATGATCTCAGAATATAAGTTATTCATGTTCCAGACACGTTTCAAGAACATTTCTGTGTACCAGTTGTCACCTGATGGTTCCAAAGAAAAGTGTTTTTATTACACCCTGTTACTGTTACTCATCAAGATCCTGATTAGCAAACTTCTAATCCATTTGCAGTGCTTTTTGTCTGTTGGCAAGGTTAGCGATACCCACACATAATGCTTTTAATATAGTGTTTCCAACATACATATTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1022216 True 522 lncRNA 0.37 1 49713693 49714214

Neighbor

gene id symbol gene type direction distance location
LOC110534929 NA coding downstream 51857 49649578 ~ 49661881 (-)
LOC110534927 LOC106603007 coding downstream 168718 49543289 ~ 49544975 (-)
LOC110533138 NA coding downstream 273831 49438004 ~ 49443736 (-)
LOC110534188 LOC106602927 coding downstream 288551 49318598 ~ 49425142 (-)
LOC110534187 NA coding downstream 395618 49313410 ~ 49318075 (-)
LOC110534195 NA coding upstream 18792 49733006 ~ 49734656 (-)
LOC110534197 LOC106602918 coding upstream 58168 49772382 ~ 49795586 (-)
LOC110534205 LOC106603005 coding upstream 321597 50035811 ~ 50037679 (-)
LOC110533140 LOC106563775 coding upstream 330842 50045056 ~ 50048932 (-)
LOC110534213 LOC106602908 coding upstream 532640 50246298 ~ 50260435 (-)
G898508 NA non-coding downstream 93 49713233 ~ 49713600 (-)
G898507 NA non-coding downstream 502 49712988 ~ 49713191 (-)
G898374 NA non-coding downstream 128080 49585409 ~ 49585613 (-)
G898373 NA non-coding downstream 128351 49585088 ~ 49585342 (-)
G898513 NA non-coding upstream 2723 49716937 ~ 49717181 (-)
G898516 NA non-coding upstream 4234 49718448 ~ 49718688 (-)
G898517 NA non-coding upstream 5427 49719641 ~ 49720006 (-)
G898708 NA non-coding upstream 31408 49745622 ~ 49746723 (-)
G898729 NA non-coding upstream 73242 49787456 ~ 49787678 (-)
LOC110534172 LOC106602940 other downstream 829618 48881449 ~ 48907973 (-)
G896841 NA other downstream 1724617 47987761 ~ 47989076 (-)
LOC110534118 LOC106603020 other downstream 2480647 47203241 ~ 47234608 (-)
G894917 NA other downstream 3795354 45917279 ~ 45918339 (-)
LOC110534046 LOC107567170 other downstream 3963362 45747090 ~ 45751405 (-)
G899409 NA other upstream 441978 50156192 ~ 50156902 (-)
G899421 NA other upstream 468182 50182396 ~ 50182788 (-)
LOC110534220 LOC106602898 other upstream 751253 50463950 ~ 50482534 (-)
G899727 NA other upstream 1006772 50720986 ~ 50721603 (-)
G899739 LOC106602890 other upstream 1028944 50743158 ~ 50750233 (-)

Expression


Co-expression Network