G898620


Basic Information

Item Value
gene id G898620
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 49865097 ~ 49865351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1022345
GCTTACATATAACTACTATGCTTTATTAGTcaattggggtggcagggtagcctcgtggttagagtgttggactagtaaccgaaaggttgcaagtttgaatccccgagctgacaaggtacaaatctgtcgtactgcccctgaacaggcagttaacccactgttcctaggccgtcattgaaaataagaatttgttcttaactgacttgcctagttaataaaaaaataaaaaatcattagTCTTGCACTGAAGGGAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1022345 True 255 lncRNA 0.41 1 49865097 49865351

Neighbor

gene id symbol gene type direction distance location
clk4b LOC106602917 coding upstream 54173 49800667 ~ 49810924 (+)
LOC110534196 LOC106602919 coding upstream 112030 49745087 ~ 49753067 (+)
LOC110534194 LOC106602920 coding upstream 134820 49725851 ~ 49730277 (+)
LOC110533139 LOC106602921 coding upstream 144527 49660880 ~ 49720570 (+)
cnot6a LOC106602922 coding upstream 246710 49605233 ~ 49618387 (+)
LOC110534202 LOC106602915 coding downstream 102793 49968144 ~ 49989740 (+)
LOC110534204 LOC106602914 coding downstream 134294 49999645 ~ 50014637 (+)
LOC110534206 LOC106602913 coding downstream 213814 50079165 ~ 50080809 (+)
LOC110534207 LOC106603003 coding downstream 221918 50087269 ~ 50088380 (+)
LOC110534208 LOC106602911 coding downstream 224965 50090316 ~ 50091208 (+)
G898585 NA non-coding upstream 43450 49821130 ~ 49821647 (+)
G898583 NA non-coding upstream 48185 49816674 ~ 49816912 (+)
G898574 NA non-coding upstream 66816 49797982 ~ 49798281 (+)
G898571 NA non-coding upstream 71739 49793052 ~ 49793358 (+)
G898568 NA non-coding upstream 73793 49791074 ~ 49791304 (+)
G898630 NA non-coding downstream 12979 49878330 ~ 49878539 (+)
G898645 NA non-coding downstream 28469 49893820 ~ 49894042 (+)
G898649 NA non-coding downstream 37506 49902857 ~ 49903073 (+)
G898692 NA non-coding downstream 100137 49965488 ~ 49965720 (+)
LOC110534189 LOC106602925 other upstream 432139 49426785 ~ 49432958 (+)
LOC110534184 LOC106563731 other upstream 583145 49277626 ~ 49282746 (+)
G897244 dach2 other upstream 1188032 48676257 ~ 48677065 (+)
G896217 NA other upstream 1629481 48235182 ~ 48235616 (+)
G896043 NA other upstream 1954122 47909716 ~ 47910975 (+)
G898894 LOC106603005 other downstream 169639 50034990 ~ 50037685 (+)
G901849 LOC106602874 other downstream 2584867 52450218 ~ 52475365 (+)
LOC110534253 hinfp other downstream 2667377 52532434 ~ 52542498 (+)
G902707 NA other downstream 3650756 53516107 ~ 53519788 (+)
G902840 LOC106602714 other downstream 3804769 53670120 ~ 53674811 (+)

Expression


Co-expression Network