G899061



Basic Information


Item Value
gene id G899061
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 50139474 ~ 50139903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1022798
ataattttgcacgcccaatttttcagtttttgatttgttaaaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaaaacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcacaaagttcaagggggccgaatactttcgcaaggcactgtatgtatgttttgtttgataagcAAAtatcgcctgcaatatcagttctgttatactcacagacaatatttttacagttttggaaactttagagtgttttctatcctaagctgtcaattatatgcatattctagcatctggtcctgagaaatagcccgtttactttgggaacgttatttttccaaaaatgaaaatactgccccctagtttcaagaggttaacttTGCAAGATACC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1022798 True 430 lncRNA 0.35 1 50139474 50139903
Loading

Neighbor


gene id symbol gene type direction distance location
LOC118936703 NA coding upstream 14615 50118466 ~ 50124859 (+)
LOC110534208 LOC106602911 coding upstream 48266 50090316 ~ 50091208 (+)
LOC110534207 LOC106603003 coding upstream 51094 50087269 ~ 50088380 (+)
LOC110534206 LOC106602913 coding upstream 58665 50079165 ~ 50080809 (+)
LOC110534204 LOC106602914 coding upstream 124837 49999645 ~ 50014637 (+)
LOC110534209 LOC106563653 coding downstream 16297 50156200 ~ 50244978 (+)
LOC110534212 LOC106602907 coding downstream 120792 50260695 ~ 50310535 (+)
rangrf rangrf coding downstream 196979 50336882 ~ 50339659 (+)
si:ch211-114c12.5 LOC106602902 coding downstream 239732 50379635 ~ 50385514 (+)
senp3a LOC106602897 coding downstream 341724 50481627 ~ 50502534 (+)
G899053 NA non-coding upstream 4766 50134297 ~ 50134708 (+)
G899052 NA non-coding upstream 6108 50133155 ~ 50133366 (+)
G899050 NA non-coding upstream 7170 50132081 ~ 50132304 (+)
G899009 NA non-coding upstream 41104 50098142 ~ 50098370 (+)
G899004 NA non-coding upstream 44880 50094217 ~ 50094594 (+)
G899069 NA non-coding downstream 8605 50148508 ~ 50148749 (+)
G899075 NA non-coding downstream 10269 50150172 ~ 50150565 (+)
G899098 NA non-coding downstream 21188 50161091 ~ 50161415 (+)
G899100 NA non-coding downstream 23205 50163108 ~ 50163350 (+)
G899119 NA non-coding downstream 47890 50187793 ~ 50188204 (+)
G898894 LOC106603005 other upstream 101789 50034990 ~ 50037685 (+)
LOC110534189 LOC106602925 other upstream 706516 49426785 ~ 49432958 (+)
LOC110534184 LOC106563731 other upstream 857522 49277626 ~ 49282746 (+)
G897244 dach2 other upstream 1462409 48676257 ~ 48677065 (+)
G896217 NA other upstream 1903858 48235182 ~ 48235616 (+)
G901849 LOC106602874 other downstream 2310315 52450218 ~ 52475365 (+)
LOC110534253 hinfp other downstream 2392825 52532434 ~ 52542498 (+)
G902707 NA other downstream 3376204 53516107 ~ 53519788 (+)
G902840 LOC106602714 other downstream 3530217 53670120 ~ 53674811 (+)
helt helt other downstream 3837528 53977386 ~ 53980090 (+)

Expression


G899061 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
End of interactive chart.

G899061 Expression in each Bioproject

Bar chart with 20 bars.
G899061 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network