Gene
RNA
| Item | Value |
|---|---|
| gene id | G899417 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 50166471 ~ 50166714 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| calcium-binding protein 8-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1023174 | True | 244 | lncRNA | 0.45 | 1 | 50166471 | 50166714 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533140 | LOC106563775 | coding | downstream | 117539 | 50045056 ~ 50048932 (-) |
| LOC110534205 | LOC106603005 | coding | downstream | 128792 | 50035811 ~ 50037679 (-) |
| LOC110534197 | LOC106602918 | coding | downstream | 370885 | 49772382 ~ 49795586 (-) |
| LOC110534195 | NA | coding | downstream | 431815 | 49733006 ~ 49734656 (-) |
| LOC110534929 | NA | coding | downstream | 504635 | 49649578 ~ 49661881 (-) |
| LOC110534213 | LOC106602908 | coding | upstream | 80140 | 50246298 ~ 50260435 (-) |
| grk1b | NA | coding | upstream | 152356 | 50319070 ~ 50326034 (-) |
| slc25a35 | slc25a35 | coding | upstream | 174402 | 50341116 ~ 50353286 (-) |
| LOC118936704 | NA | coding | upstream | 179808 | 50346522 ~ 50349995 (-) |
| tp53 | tp53 | coding | upstream | 221234 | 50387948 ~ 50399688 (-) |
| G899413 | NA | non-coding | downstream | 3964 | 50162187 ~ 50162507 (-) |
| G899411 | NA | non-coding | downstream | 7351 | 50158917 ~ 50159120 (-) |
| G899079 | NA | non-coding | downstream | 14505 | 50151685 ~ 50151966 (-) |
| G899078 | NA | non-coding | downstream | 15331 | 50150919 ~ 50151140 (-) |
| G898945 | NA | non-coding | downstream | 156485 | 50008145 ~ 50009986 (-) |
| G899422 | NA | non-coding | upstream | 17730 | 50184444 ~ 50184725 (-) |
| G899423 | NA | non-coding | upstream | 18096 | 50184810 ~ 50185015 (-) |
| G899434 | NA | non-coding | upstream | 30984 | 50197698 ~ 50197922 (-) |
| G899518 | NA | non-coding | upstream | 156122 | 50322836 ~ 50323087 (-) |
| G899409 | NA | other | downstream | 9569 | 50156192 ~ 50156902 (-) |
| LOC110534172 | LOC106602940 | other | downstream | 1282396 | 48881449 ~ 48907973 (-) |
| G896841 | NA | other | downstream | 2177395 | 47987761 ~ 47989076 (-) |
| LOC110534118 | LOC106603020 | other | downstream | 2933425 | 47203241 ~ 47234608 (-) |
| G894917 | NA | other | downstream | 4248132 | 45917279 ~ 45918339 (-) |
| G899421 | NA | other | upstream | 15682 | 50182396 ~ 50182788 (-) |
| LOC110534220 | LOC106602898 | other | upstream | 298753 | 50463950 ~ 50482534 (-) |
| G899727 | NA | other | upstream | 554272 | 50720986 ~ 50721603 (-) |
| G899739 | LOC106602890 | other | upstream | 576444 | 50743158 ~ 50750233 (-) |
| G900070 | NA | other | upstream | 804049 | 50970763 ~ 50981750 (-) |
