G899713



Basic Information


Item Value
gene id G899713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 50680181 ~ 50680853 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1023498
TAAAGTAGCCTAGAATCACATAGTAATCACTtctaaacaaaatacattttgggggaTTCTAATAAGGCTACAATTAGGGCCCAAATGAAATCTGTTTGATTTTTGGACCAGATTACGTTTTTTTTCCCTCCAAATTCAGTTTTCTCTATTTAGTTTTTCCCTGTTTGAACAGTCGCTGAAATTATATTTGGTTATCAATGCAAAATAGGCTACTTTGATGTATAGCCTACATAGATCAGATCAAGGAACCAAGCGAGTTCGTAGTGAAATACAGCTTCATTGCCTAAACAACAATGCCCCCATGGAGTGTAGTACAAGATACGACATTGCAACACTGCACTACACTTAAGAGTAAATGCTGCTGCTCATAccgatactgaacaaaaatataaaacgcaacacgcaacaatttcaaatattttactgagttacagatcaTATAAGGCAATCggtcatttgaaataaataaatttggcccgaatctatggatttcacatgaccgggcaggggcacagccatgggtgggcctgggggggcataggcccacccagtGGGGAACCAGGCCCATCCAAACAGAattagttttcccccacaaaagttctttattacagacagaaataatccTCAACAACCCCCCGTAGTGGGTTAAATTtccgggaccacccatacgtaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1023498 True 673 lncRNA 0.40 1 50680181 50680853

Neighbor


gene id symbol gene type direction distance location
slc25a15b slc25a15 coding downstream 43133 50626130 ~ 50637048 (-)
LOC110534220 LOC106602898 coding downstream 197647 50463950 ~ 50482534 (-)
LOC110534218 LOC106602900 coding downstream 225896 50452453 ~ 50454285 (-)
LOC110534217 LOC106602903 coding downstream 238102 50400786 ~ 50442079 (-)
tp53 tp53 coding downstream 280493 50387948 ~ 50399688 (-)
LOC110534228 NA coding upstream 40837 50721690 ~ 50767820 (-)
si:ch211-215c18.3 NA coding upstream 272315 50953168 ~ 50962186 (-)
LOC110534238 bco2b coding upstream 776243 51457096 ~ 51559902 (-)
LOC110534240 bco2b coding upstream 917774 51598627 ~ 51656987 (-)
adamts15a LOC106602881 coding upstream 1408978 52089831 ~ 52124329 (-)
G899691 NA non-coding downstream 42214 50637673 ~ 50637967 (-)
G899636 NA non-coding downstream 61323 50553714 ~ 50618858 (-)
G899626 NA non-coding downstream 69116 50521567 ~ 50611065 (-)
G899620 NA non-coding downstream 170835 50509098 ~ 50509346 (-)
G899712 NA non-coding upstream 5353 50686206 ~ 50686725 (-)
G899716 NA non-coding upstream 10108 50690961 ~ 50691185 (-)
G899698 NA non-coding upstream 15587 50696440 ~ 50696737 (-)
G899696 NA non-coding upstream 16750 50697603 ~ 50697754 (-)
G899695 NA non-coding upstream 20205 50701058 ~ 50701719 (-)
G899421 NA other downstream 497393 50182396 ~ 50182788 (-)
G899409 NA other downstream 523279 50156192 ~ 50156902 (-)
LOC110534172 LOC106602940 other downstream 1796106 48881449 ~ 48907973 (-)
G896841 NA other downstream 2691105 47987761 ~ 47989076 (-)
G899727 NA other upstream 40133 50720986 ~ 50721603 (-)
G899739 LOC106602890 other upstream 62305 50743158 ~ 50750233 (-)
G900070 NA other upstream 289910 50970763 ~ 50981750 (-)
G900807 NA other upstream 774647 51455500 ~ 51455942 (-)
G902519 NA other upstream 2221341 52902194 ~ 52937648 (-)

Expression



Co-expression Network