G900094


Basic Information

Item Value
gene id G900094
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 51037551 ~ 51038387 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1023913
AGGCTGAAGGTTGTATTAATGTCAGAAATAGGTTAGTCCAAATTTTGGAAAACTAAAAATACACAAAGAACCATCAAATTCATTATTTGCTCAGTGACTGATACAAACTGATGTAGGACACCAGTGTCAGTCAGCTGGTAGTGAAACTGTCAACCAATAGACATGGTGTTCGGTTCAGTCTAGCATTTAAATAAGCCTTTTcataaaatattttatttcaaACATAAAAGGCATCACATTTTTTCTTTCACATAATGTGTGGCAAGAGTGTAGAAATACCCATATATGGGCAAGTTGTTTGAGGGGtcacaaaatacatttgatttcaaaGGTGATAAAGAACACAGACATGAGTATTATTCTGTGTAGCTTAAGTGTTTTTCTAGGTAGGATGAATGTCCATGATCATGGGGTGTCCATACAATTGTCAAGGAAGAAAACATCACAGAGGACATCCAAAAAGAGTGCAGTCCAGATTTGTTGGAAGCAACCCTCTGCATACAACTGCCTCCACTGACCAATGTTGTCGTATTCCAACAGCCCACAACATCCTAGACCTTGTTCGAATGCTTTCCAAATACATCCATCCTAGATGAAATTACAGACCCTACGTTTCACCTCTCCAATCCCATACAGATCAGTTACTACCTCAAGTGAGGAAAGGAGGGTGTATTTTCTGGCAATTCAAACAGAGCCCTCGTACAGGCACCTTTGTCACTTGTCCTTCACTGTGGATCTACACCTGCTGCTCCCACAATGCCGTTCTGTCTCAGTTGGCTTCTCATCATCTGGTTCTTGGTTTTCCAA

Function

NR:

description
upstream stimulatory factor 1-like isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1023913 True 807 lncRNA 0.40 2 51037551 51038387

Neighbor

gene id symbol gene type direction distance location
si:ch211-215c18.3 NA coding downstream 75365 50953168 ~ 50962186 (-)
LOC110534228 NA coding downstream 269731 50721690 ~ 50767820 (-)
slc25a15b slc25a15 coding downstream 400503 50626130 ~ 50637048 (-)
LOC110534220 LOC106602898 coding downstream 555017 50463950 ~ 50482534 (-)
LOC110534218 LOC106602900 coding downstream 583266 50452453 ~ 50454285 (-)
LOC110534238 bco2b coding upstream 418709 51457096 ~ 51559902 (-)
LOC110534240 bco2b coding upstream 560240 51598627 ~ 51656987 (-)
adamts15a LOC106602881 coding upstream 1051444 52089831 ~ 52124329 (-)
atf5a LOC106602866 coding upstream 1237944 52276331 ~ 52281912 (-)
phldb1a LOC106602858 coding upstream 1273813 52312200 ~ 52396922 (-)
G900087 NA non-coding downstream 31829 51005310 ~ 51005722 (-)
G900078 NA non-coding downstream 42137 50995182 ~ 50995414 (-)
G900069 LOC106602888 non-coding downstream 54292 50973847 ~ 50983259 (-)
G899992 NA non-coding downstream 79301 50926201 ~ 50958250 (-)
G899939 NA non-coding downstream 205686 50790721 ~ 50831865 (-)
G900109 NA non-coding upstream 5720 51044107 ~ 51044599 (-)
G900596 LOC106602883 non-coding upstream 104166 51142553 ~ 51153981 (-)
G900792 NA non-coding upstream 355151 51393538 ~ 51393814 (-)
G900799 NA non-coding upstream 365567 51403954 ~ 51404166 (-)
G900809 NA non-coding upstream 372952 51411339 ~ 51411820 (-)
G900070 NA other downstream 55801 50970763 ~ 50981750 (-)
G899739 LOC106602890 other downstream 287318 50743158 ~ 50750233 (-)
G899727 NA other downstream 315948 50720986 ~ 50721603 (-)
G899421 NA other downstream 854763 50182396 ~ 50182788 (-)
G900807 NA other upstream 417113 51455500 ~ 51455942 (-)
G902519 NA other upstream 1863807 52902194 ~ 52937648 (-)
casp3a LOC106602722 other upstream 2833852 53872239 ~ 53878829 (-)
G903619 primpol other upstream 2841157 53879544 ~ 53883773 (-)
cfap97 cfap97 other upstream 3043779 54082166 ~ 54111277 (-)

Expression


Co-expression Network