Gene
RNA
| Item | Value |
|---|---|
| gene id | G900283 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 51387000 ~ 51387458 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1024121 | True | 431 | lncRNA | 0.39 | 2 | 51387000 | 51387458 |
51,386,000
51,386,400
51,386,800
51,387,200
51,387,600
51,388,000
51,388,400
51,388,800
51,389,200
51,389,600
51,390,000
51,390,400
51,390,800
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534237 | NA | coding | upstream | 87218 | 51188850 ~ 51366070 (+) |
| ubash3ba | LOC106602883 | coding | upstream | 236577 | 51093777 ~ 51150423 (+) |
| f11r.1 | LOC106602884 | coding | upstream | 293375 | 51047315 ~ 51093625 (+) |
| LOC110534231 | LOC106602885 | coding | upstream | 348550 | 51013450 ~ 51038450 (+) |
| thy1 | LOC106602888 | coding | upstream | 402319 | 50981984 ~ 50984681 (+) |
| adamts8a | LOC106602880 | coding | downstream | 739276 | 52126734 ~ 52155344 (+) |
| c10h11orf53 | LOC106602872 | coding | downstream | 867043 | 52254501 ~ 52259667 (+) |
| stk36 | stk36 | coding | downstream | 876897 | 52264355 ~ 52275012 (+) |
| hmbsa | LOC106602870 | coding | downstream | 1038489 | 52425947 ~ 52449734 (+) |
| dpagt1 | dpagt1 | coding | downstream | 1127331 | 52514789 ~ 52526085 (+) |
| G900152 | NA | non-coding | upstream | 200763 | 51124738 ~ 51186237 (+) |
| G900134 | NA | non-coding | upstream | 301467 | 51082811 ~ 51085533 (+) |
| G899930 | NA | non-coding | upstream | 374418 | 51012348 ~ 51012582 (+) |
| G899925 | NA | non-coding | upstream | 380493 | 51006218 ~ 51006507 (+) |
| G900291 | NA | non-coding | downstream | 909 | 51388367 ~ 51388580 (+) |
| G900293 | NA | non-coding | downstream | 3474 | 51390932 ~ 51391153 (+) |
| G900294 | NA | non-coding | downstream | 3743 | 51391201 ~ 51391421 (+) |
| G900298 | NA | non-coding | downstream | 8230 | 51395688 ~ 51395889 (+) |
| G900300 | NA | non-coding | downstream | 11494 | 51398952 ~ 51399432 (+) |
| G898894 | LOC106603005 | other | upstream | 1349315 | 50034990 ~ 50037685 (+) |
| LOC110534189 | LOC106602925 | other | upstream | 1954042 | 49426785 ~ 49432958 (+) |
| LOC110534184 | LOC106563731 | other | upstream | 2105048 | 49277626 ~ 49282746 (+) |
| G897244 | dach2 | other | upstream | 2709935 | 48676257 ~ 48677065 (+) |
| G896217 | NA | other | upstream | 3151384 | 48235182 ~ 48235616 (+) |
| G901849 | LOC106602874 | other | downstream | 1062760 | 52450218 ~ 52475365 (+) |
| LOC110534253 | hinfp | other | downstream | 1145270 | 52532434 ~ 52542498 (+) |
| G902707 | NA | other | downstream | 2128649 | 53516107 ~ 53519788 (+) |
| G902840 | LOC106602714 | other | downstream | 2282662 | 53670120 ~ 53674811 (+) |
| helt | helt | other | downstream | 2589973 | 53977386 ~ 53980090 (+) |
