G900805


Basic Information

Item Value
gene id G900805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 51454833 ~ 51455337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1024666
ggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatatgagatTCACCGAAATTAAagtaatccaggcatttatatgtAAATTCTAATTGTACTTTATCAAACTCCTTTTTGAAATGAGAGAGACTGTAAGTGTGTCCATTCACTACAACAAATATCCATGTTCAAGTAACTTCAATTGTTATAGATCAGAATACATCATGCAATTTAGTTTCAAAAAGTTCATAAAACATTCAACAGTTAAGTATTTACAACTTAAGAAGACCTTATGGGTGGTGATGTCACTTTATTACTTTAAGTATTGAACACTGAAATACTTGGGTTACTCAAATGGTTCTAGGCAACTGGTTTCCACATAAAATAATTGTTAGCAGAACTAATTACTTTATACAGTGCAGAATCTGATGCCTTAGTTTACATTAAGTTACACATGCATATCCACTAACaatcttttgtattttttgtcaATTTTATACAAATTGTTTTACTATGTTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1024666 True 505 lncRNA 0.32 1 51454833 51455337

Neighbor

gene id symbol gene type direction distance location
si:ch211-215c18.3 NA coding downstream 492647 50953168 ~ 50962186 (-)
LOC110534228 NA coding downstream 687013 50721690 ~ 50767820 (-)
slc25a15b slc25a15 coding downstream 817785 50626130 ~ 50637048 (-)
LOC110534220 LOC106602898 coding downstream 972299 50463950 ~ 50482534 (-)
LOC110534218 LOC106602900 coding downstream 1000548 50452453 ~ 50454285 (-)
LOC110534238 bco2b coding upstream 1759 51457096 ~ 51559902 (-)
LOC110534240 bco2b coding upstream 143290 51598627 ~ 51656987 (-)
adamts15a LOC106602881 coding upstream 634494 52089831 ~ 52124329 (-)
atf5a LOC106602866 coding upstream 820994 52276331 ~ 52281912 (-)
phldb1a LOC106602858 coding upstream 856863 52312200 ~ 52396922 (-)
G900817 NA non-coding downstream 35256 51419238 ~ 51419577 (-)
G900816 NA non-coding downstream 35997 51418616 ~ 51418836 (-)
G900813 NA non-coding downstream 38665 51415967 ~ 51416168 (-)
G900809 NA non-coding downstream 43013 51411339 ~ 51411820 (-)
G900799 NA non-coding downstream 50667 51403954 ~ 51404166 (-)
G900920 NA non-coding upstream 139706 51595043 ~ 51595578 (-)
G900956 NA non-coding upstream 203109 51658446 ~ 51658682 (-)
G901027 NA non-coding upstream 303829 51759166 ~ 51766002 (-)
G901153 NA non-coding upstream 388623 51843960 ~ 51853430 (-)
G901191 NA non-coding upstream 447371 51902708 ~ 51902970 (-)
G900070 NA other downstream 473083 50970763 ~ 50981750 (-)
G899739 LOC106602890 other downstream 704600 50743158 ~ 50750233 (-)
G899727 NA other downstream 733230 50720986 ~ 50721603 (-)
G899421 NA other downstream 1272045 50182396 ~ 50182788 (-)
G900807 NA other upstream 163 51455500 ~ 51455942 (-)
G902519 NA other upstream 1446857 52902194 ~ 52937648 (-)
casp3a LOC106602722 other upstream 2416902 53872239 ~ 53878829 (-)
G903619 primpol other upstream 2424207 53879544 ~ 53883773 (-)
cfap97 cfap97 other upstream 2626829 54082166 ~ 54111277 (-)

Expression


Co-expression Network