G901027


Basic Information

Item Value
gene id G901027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 51759166 ~ 51766002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1024892
gaccgcacccgttatggatcgcatggattagtagcaacattgttgcgaagcgttaacatacaaaccatcggacagtcagacagtacacctgcacgcctgaagaccacagctaagatctctcttgttctctttctctttttctcttccctctatcgttccagtgctttaccctgcaacagactctctatttttccaatgcacttcccattgaagttctatagagctggactattattgccctgccagaagtatttggacatttcagttaaaagggaggttgcttgcaaattgtgtattgttatgtgaactgtattgagatgtactaatgacatgtggccgagaagactggacatttttaaggcctttgttgtgtcgatgaacacccccccacattcataccctctgcactcatctactagaaaataatacagattattgcaaatcctatgttgatgactgggttcattcttgtatgaagttgctgttgaattgctctgccattattagtattagtattattgtatgaggtattcttgtttgggttacccctgtgctgtgatgtgggttttatatggtgtgtattctcttttctctccactggctatctggtaaacaggctacactctagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1024892 True 629 lncRNA 0.42 2 51759166 51766002

Neighbor

gene id symbol gene type direction distance location
LOC110534240 bco2b coding downstream 102179 51598627 ~ 51656987 (-)
LOC110534238 bco2b coding downstream 199264 51457096 ~ 51559902 (-)
si:ch211-215c18.3 NA coding downstream 796980 50953168 ~ 50962186 (-)
LOC110534228 NA coding downstream 991346 50721690 ~ 50767820 (-)
slc25a15b slc25a15 coding downstream 1122118 50626130 ~ 50637048 (-)
adamts15a LOC106602881 coding upstream 323829 52089831 ~ 52124329 (-)
atf5a LOC106602866 coding upstream 510329 52276331 ~ 52281912 (-)
phldb1a LOC106602858 coding upstream 546198 52312200 ~ 52396922 (-)
arcn1a copd coding upstream 631829 52397831 ~ 52413158 (-)
LOC110534249 LOC106602874 coding upstream 684208 52450210 ~ 52450882 (-)
G900956 NA non-coding downstream 100484 51658446 ~ 51658682 (-)
G900920 NA non-coding downstream 163588 51595043 ~ 51595578 (-)
G900805 NA non-coding downstream 303829 51454833 ~ 51455337 (-)
G900817 NA non-coding downstream 339589 51419238 ~ 51419577 (-)
G900816 NA non-coding downstream 340330 51418616 ~ 51418836 (-)
G901153 NA non-coding upstream 77958 51843960 ~ 51853430 (-)
G901191 NA non-coding upstream 136706 51902708 ~ 51902970 (-)
G901203 NA non-coding upstream 143506 51909508 ~ 51910763 (-)
G901208 NA non-coding upstream 148765 51914767 ~ 51915056 (-)
G901212 NA non-coding upstream 151876 51917878 ~ 51918245 (-)
G900807 NA other downstream 303224 51455500 ~ 51455942 (-)
G900070 NA other downstream 777416 50970763 ~ 50981750 (-)
G899739 LOC106602890 other downstream 1008933 50743158 ~ 50750233 (-)
G899727 NA other downstream 1037563 50720986 ~ 50721603 (-)
LOC110534220 LOC106602898 other downstream 1287288 50463950 ~ 50482534 (-)
G902519 NA other upstream 1136192 52902194 ~ 52937648 (-)
casp3a LOC106602722 other upstream 2106237 53872239 ~ 53878829 (-)
G903619 primpol other upstream 2113542 53879544 ~ 53883773 (-)
cfap97 cfap97 other upstream 2316164 54082166 ~ 54111277 (-)
G904991 NA other upstream 3513497 55279499 ~ 55280341 (-)

Expression


Co-expression Network