G902247


Basic Information

Item Value
gene id G902247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 52672678 ~ 52689521 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1026212
TTCCATTTATGAATCTGTCATTCACTGCATTTCTATAGGCTTATACTGTTAAGGCCATATTCAATGTTTCATAAAAAAAACTTTGCTGTGATACGTGCAAGGGTCCTAAAAGTCTAAATAAAATAGCCAAATGATCTTAAAGCATCCCTGTGTCCATCTATCAATCCACAATATCTCTGAAGGTAGTGGGGGTCAATTTAACTGCACGGGTAAACATTATATACTAAGATCATGTCTTGCCTATACAAACTGGATTACATGAACTAATGGATTCAATACTAACTTTGTAGTTAGTACAGATTTAATTCAACGTAAGCAATTTCCGTTATAATGTTACCTAGTCTTGGCCCATTATGGTCTTTCTCATATCACAGTAGATACTTTGCGCGTTGCGCCTCCATCCACTTAATGTAATTAATCAATAATTAAATGCCAACACATGAATCAAAAGGATAGACTTCCTATAATGAAGTGATAAAACAAAATCGATAGTAACATAATATATTAGGACATATTGATATATTTTTTGTACTAGGTAGCATTAGCTAGCGCTAGTCAGATCTTTCTGCGCCAAAACTGCAGCATGTGTCATCCTTTTCAGGACTTTTATTTCCGTGACTGATACACATTTTCTCATGAGCTCTCATCTCTCTGCTGCAAACAGTGAGCAGTAGGTTCGGAATAtcaaatcacaatacatatatcagCCAGTACTTTTGTACATTTTatgaattacatttacttttgatacttaagtatatttaaaacccaaatacttttacacttttactcaagtagcattttactgggtgact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1026212 True 815 lncRNA 0.34 2 52672678 52689521

Neighbor

gene id symbol gene type direction distance location
ftr82 LOC106602865 coding downstream 29211 52637776 ~ 52643467 (-)
ift22 ift22 coding downstream 43002 52626882 ~ 52629676 (-)
c2cd2l c2cd2l coding downstream 157879 52467134 ~ 52514799 (-)
LOC110534249 LOC106602874 coding downstream 221796 52450210 ~ 52450882 (-)
arcn1a copd coding downstream 259520 52397831 ~ 52413158 (-)
spns2 LOC106602867 coding upstream 16444 52705965 ~ 52847128 (-)
LOC110534265 LOC106602857 coding upstream 251329 52940850 ~ 52962268 (-)
LOC118966634 LOC106602857 coding upstream 424568 53114089 ~ 53126109 (-)
LOC110534268 LOC106602801 coding upstream 700520 53390041 ~ 53419391 (-)
LOC110534271 LOC106602804 coding upstream 826803 53516324 ~ 53519848 (-)
G902166 NA non-coding downstream 20516 52592563 ~ 52652162 (-)
G902161 NA non-coding downstream 61319 52547834 ~ 52611359 (-)
G902160 NA non-coding downstream 125190 52546830 ~ 52547488 (-)
G902157 NA non-coding downstream 131086 52540670 ~ 52541592 (-)
G902156 NA non-coding downstream 133152 52538735 ~ 52539526 (-)
G902276 NA non-coding upstream 20072 52709593 ~ 52709816 (-)
G902277 NA non-coding upstream 20486 52710007 ~ 52710311 (-)
G902278 NA non-coding upstream 21956 52711477 ~ 52711812 (-)
G902286 NA non-coding upstream 40366 52729887 ~ 52730188 (-)
G900807 NA other downstream 1216736 51455500 ~ 51455942 (-)
G900070 NA other downstream 1690928 50970763 ~ 50981750 (-)
G899739 LOC106602890 other downstream 1922445 50743158 ~ 50750233 (-)
G899727 NA other downstream 1951075 50720986 ~ 50721603 (-)
LOC110534220 LOC106602898 other downstream 2200800 50463950 ~ 50482534 (-)
G902519 NA other upstream 212673 52902194 ~ 52937648 (-)
casp3a LOC106602722 other upstream 1182718 53872239 ~ 53878829 (-)
G903619 primpol other upstream 1190023 53879544 ~ 53883773 (-)
cfap97 cfap97 other upstream 1392645 54082166 ~ 54111277 (-)
G904991 NA other upstream 2589978 55279499 ~ 55280341 (-)

Expression


Co-expression Network