G902707


Basic Information

Item Value
gene id G902707
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 53516107 ~ 53519788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1026857
GCACGGTCTATTGTTGAAACTTAGAGGAAGATCAGATCCCATTTGACCAATTTAtgtagaaatccaggtaattccaaagggttcatacTTTTTCTTAACAGTTTTAGGAGCCATGGAGCCTCTTATGGATGTGAAAATGATCAATACAAATAGAACCAGGATGTTTGTTTCAGTCATTGACATTATTTTAGATGTatgaaacaataaaaaaaaacagtaacAGCATTTCAGCAAAACATTTAATTCAATTCCACATTTCACTTCTGGCTGGACTCAGATTTGGATGTGGAGGCCCTAAGGGAGGAGAGACGGCGCCTTTTGGCGATCTGTTCCTGGCGCTTCTCCTTAGCCTCCTTCATCCTCTTGGCCAGCAGCTTGGCGTACTCGGAAGCCTCTTCCTTGTTCTTCTGGGTGCGCTGTTTCTTAAGGGCAATGCGGCGGCGCTTGTGCTGCAGCACACGAGGTGTCACTAGCCTCTGGATCCTGGGAGCCTTGGTCCTAGGCTTCTTACCTTCTTTAGTCAGGGGTCTCCTCACAACATACTGCCTGACATCATCCTCCTTGGCCAGGTTGAAGAGCTTGCGGATCTTGCTGGCCCTCTTGGGCCCCAAGCGGCGGGGCACAGTGCTGTCGGTCAGGCCGGGGATGTCCTTCTCACCTTTTCTTGATGATAACCAAGTTCAGCACGCTGAGGTTGGCATCAACGATGCAACCACGGACAGACTTGCGTTTGCGCTCTCCTGTCCTACGGGGGCGGTAACAGGAATGGCCCTTGGCAAGCAGCAAGCGCACACGGCCATGGGTCAGCACACCCTGCTTCATGGGGAAGCCCTGCTTGTCGTTGCCTCCGCTGATGCGCACCATGTAGCCCtCACTCATCTCCCAGGGGATCAGCAGCCACCTCTGTGGCCATACGCTTCTCGTAGAAGGTTCGCAACTTGCGCTCATCATCCACTTCAATCAGCTTCTGACAGCCAGTGGCAGGAAACGAGATATTCTTCATTTTGTAAAACTGGCTCGACAACAGTCTGCCACCGAAAAGAG
>TU1026853
cTGTCAAGAGTTTACAAGTGCTGATGTGCTAAGCTTGTTACCAATCCATTCATTAACAGGACCATTTAGAAGCAGTGTTGGCCTCACCTTCTTTAGTCAGGGGTCTCCTCACAACATACTGCCTGACATCATCCTCCTTGGCCAGGTTGAAGAGCTTGCGGATCTTGCTGGCCCTCTTGGGCCCCAAGCGGCGGGGCACAGTGCTGTCGGTCAGGCCGGGGATGTCCTTCTCACCTTTCTTGATGATAACCAAGTTCAGCACGCTGAGGTTGGCATCAACGATGCAACCACGGACAGACTTGCGTTTGCGCTCTCCTGTCCTACGGGGGCGGTAACAGGAATGGCCCTTGGCAAGCAGCAAGCGCACACGGCCATGGGTCAGCACACCCTGCTTCATGGGGAAGCCCTGCTTGTCGTTGCCTCCGCTGATGCGCACCATGTAGCCCTCCACTCATCTCCCAGGGGATCAGCAGCCACCTCTGTGGCCATACGCTTCTCGTAGAAGGTTCGCAACTTGCGCTCATCATCCACTTCAATCAGCTTCTGACAGCCAGTGGCAGGAAACGAGATATTCAGCTTCATTTTGTAAAACTGGCTCGACAACAGTCTGCCACCGAAAAGAG

Function

NR:

description
PREDICTED: 40S ribosomal protein S6-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1026857 False 1044 TUCP 0.51 6 53516107 53519788
TU1026853 True 623 lncRNA 0.54 4 53517327 53519788

Neighbor

gene id symbol gene type direction distance location
LOC110534270 LOC106602803 coding upstream 16544 53495704 ~ 53500783 (+)
LOC110534269 LOC106591825 coding upstream 37961 53453977 ~ 53479366 (+)
cntrob LOC106602799 coding upstream 163117 53313930 ~ 53354210 (+)
LOC118966635 fis1 coding upstream 383931 53126760 ~ 53133396 (+)
LOC110533143 fis1 coding upstream 552317 52963093 ~ 52965010 (+)
LOC110534272 LOC106602712 coding downstream 3065 53522853 ~ 53554003 (+)
LOC110534273 LOC106602713 coding downstream 41755 53561543 ~ 53600267 (+)
LOC110534276 LOC106602715 coding downstream 96137 53615925 ~ 53647711 (+)
LOC110534277 lgi2 coding downstream 188594 53708382 ~ 53718910 (+)
LOC110534278 ccdc149 coding downstream 199818 53719606 ~ 53741239 (+)
G902759 NA non-coding upstream 11972 53504752 ~ 53505355 (+)
G902756 NA non-coding upstream 14627 53502401 ~ 53502700 (+)
G902713 NA non-coding upstream 35112 53480973 ~ 53482215 (+)
G902733 NA non-coding upstream 67980 53425558 ~ 53449347 (+)
G902729 LOC106602801 non-coding upstream 98436 53418562 ~ 53418891 (+)
G902771 NA non-coding downstream 37363 53557151 ~ 53557371 (+)
G902798 NA non-coding downstream 86549 53606337 ~ 53606571 (+)
G902801 NA non-coding downstream 90812 53610600 ~ 53610950 (+)
G902802 NA non-coding downstream 91906 53611694 ~ 53611973 (+)
G902808 NA non-coding downstream 132706 53652494 ~ 53654838 (+)
LOC110534253 hinfp other upstream 981677 52532434 ~ 52542498 (+)
G901849 LOC106602874 other upstream 1041962 52450218 ~ 52475365 (+)
G898894 LOC106603005 other upstream 3479642 50034990 ~ 50037685 (+)
LOC110534189 LOC106602925 other upstream 4084369 49426785 ~ 49432958 (+)
LOC110534184 LOC106563731 other upstream 4235375 49277626 ~ 49282746 (+)
G902840 LOC106602714 other downstream 150332 53670120 ~ 53674811 (+)
helt helt other downstream 457643 53977386 ~ 53980090 (+)
G904621 LOC106567469 other downstream 1711111 55230899 ~ 55231255 (+)
G904663 NA other downstream 1775449 55295237 ~ 55296054 (+)
G906606 LOC100136012 other downstream 3136511 56656299 ~ 56656552 (+)

Expression


Co-expression Network