Gene
RNA
| Item | Value |
|---|---|
| gene id | G902707 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 53516107 ~ 53519788 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 40S ribosomal protein S6-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1026857 | False | 1044 | TUCP | 0.51 | 6 | 53516107 | 53519788 |
| TU1026853 | True | 623 | lncRNA | 0.54 | 4 | 53517327 | 53519788 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534270 | LOC106602803 | coding | upstream | 16544 | 53495704 ~ 53500783 (+) |
| LOC110534269 | LOC106591825 | coding | upstream | 37961 | 53453977 ~ 53479366 (+) |
| cntrob | LOC106602799 | coding | upstream | 163117 | 53313930 ~ 53354210 (+) |
| LOC118966635 | fis1 | coding | upstream | 383931 | 53126760 ~ 53133396 (+) |
| LOC110533143 | fis1 | coding | upstream | 552317 | 52963093 ~ 52965010 (+) |
| LOC110534272 | LOC106602712 | coding | downstream | 3065 | 53522853 ~ 53554003 (+) |
| LOC110534273 | LOC106602713 | coding | downstream | 41755 | 53561543 ~ 53600267 (+) |
| LOC110534276 | LOC106602715 | coding | downstream | 96137 | 53615925 ~ 53647711 (+) |
| LOC110534277 | lgi2 | coding | downstream | 188594 | 53708382 ~ 53718910 (+) |
| LOC110534278 | ccdc149 | coding | downstream | 199818 | 53719606 ~ 53741239 (+) |
| G902759 | NA | non-coding | upstream | 11972 | 53504752 ~ 53505355 (+) |
| G902756 | NA | non-coding | upstream | 14627 | 53502401 ~ 53502700 (+) |
| G902713 | NA | non-coding | upstream | 35112 | 53480973 ~ 53482215 (+) |
| G902733 | NA | non-coding | upstream | 67980 | 53425558 ~ 53449347 (+) |
| G902729 | LOC106602801 | non-coding | upstream | 98436 | 53418562 ~ 53418891 (+) |
| G902771 | NA | non-coding | downstream | 37363 | 53557151 ~ 53557371 (+) |
| G902798 | NA | non-coding | downstream | 86549 | 53606337 ~ 53606571 (+) |
| G902801 | NA | non-coding | downstream | 90812 | 53610600 ~ 53610950 (+) |
| G902802 | NA | non-coding | downstream | 91906 | 53611694 ~ 53611973 (+) |
| G902808 | NA | non-coding | downstream | 132706 | 53652494 ~ 53654838 (+) |
| LOC110534253 | hinfp | other | upstream | 981677 | 52532434 ~ 52542498 (+) |
| G901849 | LOC106602874 | other | upstream | 1041962 | 52450218 ~ 52475365 (+) |
| G898894 | LOC106603005 | other | upstream | 3479642 | 50034990 ~ 50037685 (+) |
| LOC110534189 | LOC106602925 | other | upstream | 4084369 | 49426785 ~ 49432958 (+) |
| LOC110534184 | LOC106563731 | other | upstream | 4235375 | 49277626 ~ 49282746 (+) |
| G902840 | LOC106602714 | other | downstream | 150332 | 53670120 ~ 53674811 (+) |
| helt | helt | other | downstream | 457643 | 53977386 ~ 53980090 (+) |
| G904621 | LOC106567469 | other | downstream | 1711111 | 55230899 ~ 55231255 (+) |
| G904663 | NA | other | downstream | 1775449 | 55295237 ~ 55296054 (+) |
| G906606 | LOC100136012 | other | downstream | 3136511 | 56656299 ~ 56656552 (+) |
