G904372



Basic Information


Item Value
gene id G904372
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 54781461 ~ 54781723 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1028729
TGTCTGCCGTTTTACGGACTCCTAAcaaattgtgctattgtgttatttttcccacattatttgtaacttattttgtacataatgtttctgccaccgtcttttatgaccaaaaagagcttctggatatcaggactgcatttactcacctcgtactggatgAAGATGTTTTCTTTAAGGAGTCGGATGccaaggatttacttcagacacccgacaaggcccaaatccccgtcattcgcatgagaaagagacggagatatcTGGGA

Function


NR:

description
PREDICTED: neurotrophin receptor-interacting factor 1-like isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1028729 True 263 lncRNA 0.41 1 54781461 54781723

Neighbor


gene id symbol gene type direction distance location
fam193a LOC106610017 coding downstream 1478 54750072 ~ 54779983 (-)
LOC118937069 NA coding downstream 58259 54723150 ~ 54723202 (-)
LOC100135808 LOC100135808 coding downstream 63802 54716329 ~ 54717659 (-)
sparcl1 LOC106602739 coding downstream 75603 54690069 ~ 54705858 (-)
LOC110534935 LOC106602741 coding downstream 91952 54681566 ~ 54689509 (-)
LOC110534316 NA coding upstream 195540 54976939 ~ 54985945 (-)
LOC110534319 LOC106602749 coding upstream 370813 55152536 ~ 55155586 (-)
dchs2 dchs2 coding upstream 395131 55176854 ~ 55230032 (-)
LOC110533147 LOC106602751 coding upstream 467781 55249504 ~ 55251281 (-)
cisd2 LOC106602754 coding upstream 656816 55438539 ~ 55443132 (-)
G904263 NA non-coding downstream 66946 54714306 ~ 54714515 (-)
G904258 NA non-coding downstream 73695 54707316 ~ 54707766 (-)
G904204 NA non-coding downstream 105395 54675456 ~ 54676066 (-)
G904374 NA non-coding upstream 819 54782542 ~ 54782859 (-)
G904383 LOC106581475 non-coding upstream 14005 54795728 ~ 54795972 (-)
G904397 NA non-coding upstream 53485 54835208 ~ 54835438 (-)
G904398 NA non-coding upstream 53882 54835605 ~ 54842345 (-)
G904446 NA non-coding upstream 126061 54907784 ~ 54910341 (-)
cfap97 cfap97 other downstream 678056 54082166 ~ 54111277 (-)
G903619 primpol other downstream 897688 53879544 ~ 53883773 (-)
casp3a LOC106602722 other downstream 902672 53872239 ~ 53878829 (-)
G902519 NA other downstream 1853059 52902194 ~ 52937648 (-)
G900807 NA other downstream 3325519 51455500 ~ 51455942 (-)
G904991 NA other upstream 497776 55279499 ~ 55280341 (-)
LOC110534325 NA other upstream 745802 55527525 ~ 55528458 (-)
G905177 LOC106604999 other upstream 747143 55528866 ~ 55529192 (-)
G906663 NA other upstream 1937660 56690485 ~ 56751990 (-)
G908286 NA other upstream 2676517 57458240 ~ 57890617 (-)

Expression



Co-expression Network