Gene
RNA
| Item | Value |
|---|---|
| gene id | G904374 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 54782542 ~ 54782859 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1028731 | True | 318 | lncRNA | 0.44 | 1 | 54782542 | 54782859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fam193a | LOC106610017 | coding | downstream | 2559 | 54750072 ~ 54779983 (-) |
| LOC118937069 | NA | coding | downstream | 59340 | 54723150 ~ 54723202 (-) |
| LOC100135808 | LOC100135808 | coding | downstream | 64883 | 54716329 ~ 54717659 (-) |
| sparcl1 | LOC106602739 | coding | downstream | 76684 | 54690069 ~ 54705858 (-) |
| LOC110534935 | LOC106602741 | coding | downstream | 93033 | 54681566 ~ 54689509 (-) |
| LOC110534316 | NA | coding | upstream | 194404 | 54976939 ~ 54985945 (-) |
| LOC110534319 | LOC106602749 | coding | upstream | 369677 | 55152536 ~ 55155586 (-) |
| dchs2 | dchs2 | coding | upstream | 393995 | 55176854 ~ 55230032 (-) |
| LOC110533147 | LOC106602751 | coding | upstream | 466645 | 55249504 ~ 55251281 (-) |
| cisd2 | LOC106602754 | coding | upstream | 655680 | 55438539 ~ 55443132 (-) |
| G904372 | NA | non-coding | downstream | 819 | 54781461 ~ 54781723 (-) |
| G904263 | NA | non-coding | downstream | 68027 | 54714306 ~ 54714515 (-) |
| G904258 | NA | non-coding | downstream | 74776 | 54707316 ~ 54707766 (-) |
| G904383 | LOC106581475 | non-coding | upstream | 12869 | 54795728 ~ 54795972 (-) |
| G904397 | NA | non-coding | upstream | 52349 | 54835208 ~ 54835438 (-) |
| G904398 | NA | non-coding | upstream | 52746 | 54835605 ~ 54842345 (-) |
| G904446 | NA | non-coding | upstream | 124925 | 54907784 ~ 54910341 (-) |
| G904466 | NA | non-coding | upstream | 140027 | 54922886 ~ 54923099 (-) |
| cfap97 | cfap97 | other | downstream | 679137 | 54082166 ~ 54111277 (-) |
| G903619 | primpol | other | downstream | 898769 | 53879544 ~ 53883773 (-) |
| casp3a | LOC106602722 | other | downstream | 903753 | 53872239 ~ 53878829 (-) |
| G902519 | NA | other | downstream | 1854140 | 52902194 ~ 52937648 (-) |
| G900807 | NA | other | downstream | 3326600 | 51455500 ~ 51455942 (-) |
| G904991 | NA | other | upstream | 496640 | 55279499 ~ 55280341 (-) |
| LOC110534325 | NA | other | upstream | 744666 | 55527525 ~ 55528458 (-) |
| G905177 | LOC106604999 | other | upstream | 746007 | 55528866 ~ 55529192 (-) |
| G906663 | NA | other | upstream | 1936524 | 56690485 ~ 56751990 (-) |
| G908286 | NA | other | upstream | 2675381 | 57458240 ~ 57890617 (-) |
