Gene
RNA
| Item | Value |
|---|---|
| gene id | G904646 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 55256747 ~ 55256979 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1029035 | True | 233 | lncRNA | 0.40 | 1 | 55256747 | 55256979 |
55,254,400
55,254,800
55,255,200
55,255,600
55,256,000
55,256,400
55,256,800
55,257,200
55,257,600
55,258,000
55,258,400
55,258,800
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem131l | LOC106602747 | coding | upstream | 113197 | 55043454 ~ 55143550 (+) |
| LOC110534317 | mnd1 | coding | upstream | 214711 | 55015580 ~ 55042036 (+) |
| trim2a | LOC106602744 | coding | upstream | 242192 | 54948390 ~ 55014555 (+) |
| fhdc1 | LOC106602742 | coding | upstream | 346532 | 54845361 ~ 54910259 (+) |
| arfip1 | arfp1 | coding | upstream | 426877 | 54796229 ~ 54829870 (+) |
| cnga1a | LOC106602752 | coding | downstream | 9644 | 55266623 ~ 55277393 (+) |
| LOC110533148 | tacr3 | coding | downstream | 59471 | 55316450 ~ 55356923 (+) |
| LOC110534323 | LOC106602753 | coding | downstream | 157533 | 55414512 ~ 55436186 (+) |
| suclg1 | LOC106602756 | coding | downstream | 188915 | 55445894 ~ 55467323 (+) |
| LOC118936709 | NA | coding | downstream | 725653 | 55982632 ~ 55984568 (+) |
| G904643 | NA | non-coding | upstream | 1756 | 55254774 ~ 55254991 (+) |
| G904639 | LOC106602751 | non-coding | upstream | 6534 | 55249880 ~ 55250213 (+) |
| G904636 | NA | non-coding | upstream | 10353 | 55245979 ~ 55246394 (+) |
| G904635 | NA | non-coding | upstream | 10854 | 55245662 ~ 55245893 (+) |
| G904628 | NA | non-coding | upstream | 12729 | 55243421 ~ 55244018 (+) |
| G904651 | NA | non-coding | downstream | 7625 | 55264604 ~ 55265096 (+) |
| G904633 | NA | non-coding | downstream | 23535 | 55280514 ~ 55282713 (+) |
| G904657 | NA | non-coding | downstream | 31661 | 55288640 ~ 55289062 (+) |
| G905169 | NA | non-coding | downstream | 267832 | 55524811 ~ 55525104 (+) |
| G905171 | NA | non-coding | downstream | 269331 | 55526310 ~ 55526540 (+) |
| G904621 | LOC106567469 | other | upstream | 25492 | 55230899 ~ 55231255 (+) |
| helt | helt | other | upstream | 1277475 | 53977386 ~ 53980090 (+) |
| G902840 | LOC106602714 | other | upstream | 1581936 | 53670120 ~ 53674811 (+) |
| G902707 | NA | other | upstream | 1736959 | 53516107 ~ 53519788 (+) |
| LOC110534253 | hinfp | other | upstream | 2721097 | 52532434 ~ 52542498 (+) |
| G904663 | NA | other | downstream | 38258 | 55295237 ~ 55296054 (+) |
| G906606 | LOC100136012 | other | downstream | 1399320 | 56656299 ~ 56656552 (+) |
| LOC110534329 | LOC106602762 | other | downstream | 1733025 | 56953710 ~ 56991150 (+) |
| LOC110534333 | LOC106602771 | other | downstream | 1895785 | 57142719 ~ 57206820 (+) |
| LOC110534354 | NA | other | downstream | 2411603 | 57645943 ~ 57671502 (+) |
