Gene
RNA
| Item | Value |
|---|---|
| gene id | G905179 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 55531379 ~ 55531624 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: latrophilin-like protein LAT-2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1029598 | True | 246 | lncRNA | 0.59 | 1 | 55531379 | 55531624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| suclg1 | LOC106602756 | coding | upstream | 64056 | 55445894 ~ 55467323 (+) |
| LOC110534323 | LOC106602753 | coding | upstream | 95193 | 55414512 ~ 55436186 (+) |
| LOC110533148 | tacr3 | coding | upstream | 174456 | 55316450 ~ 55356923 (+) |
| cnga1a | LOC106602752 | coding | upstream | 253986 | 55266623 ~ 55277393 (+) |
| tmem131l | LOC106602747 | coding | upstream | 387829 | 55043454 ~ 55143550 (+) |
| LOC118936709 | NA | coding | downstream | 451008 | 55982632 ~ 55984568 (+) |
| LOC110534327 | LOC106602758 | coding | downstream | 641808 | 56173432 ~ 56177148 (+) |
| LOC110534937 | NA | coding | downstream | 1143090 | 56674714 ~ 56676532 (+) |
| LOC110534328 | NA | coding | downstream | 1156061 | 56687685 ~ 56693360 (+) |
| LOC118936710 | NA | coding | downstream | 1168634 | 56700258 ~ 56707998 (+) |
| G905178 | LOC106611608 | non-coding | upstream | 1496 | 55529657 ~ 55529883 (+) |
| G905174 | LOC106611607 | non-coding | upstream | 3459 | 55527705 ~ 55527920 (+) |
| G905171 | NA | non-coding | upstream | 4839 | 55526310 ~ 55526540 (+) |
| G905169 | NA | non-coding | upstream | 6275 | 55524811 ~ 55525104 (+) |
| G904657 | NA | non-coding | upstream | 242317 | 55288640 ~ 55289062 (+) |
| G905210 | NA | non-coding | downstream | 22711 | 55554335 ~ 55554590 (+) |
| G905215 | NA | non-coding | downstream | 28227 | 55559851 ~ 55560130 (+) |
| G905424 | NA | non-coding | downstream | 202114 | 55733738 ~ 55740330 (+) |
| G905439 | NA | non-coding | downstream | 215813 | 55747437 ~ 55747826 (+) |
| G905548 | NA | non-coding | downstream | 311750 | 55843374 ~ 55843640 (+) |
| G904663 | NA | other | upstream | 235325 | 55295237 ~ 55296054 (+) |
| G904621 | LOC106567469 | other | upstream | 300124 | 55230899 ~ 55231255 (+) |
| helt | helt | other | upstream | 1552107 | 53977386 ~ 53980090 (+) |
| G902840 | LOC106602714 | other | upstream | 1856568 | 53670120 ~ 53674811 (+) |
| G902707 | NA | other | upstream | 2011591 | 53516107 ~ 53519788 (+) |
| G906606 | LOC100136012 | other | downstream | 1124675 | 56656299 ~ 56656552 (+) |
| LOC110534329 | LOC106602762 | other | downstream | 1458380 | 56953710 ~ 56991150 (+) |
| LOC110534333 | LOC106602771 | other | downstream | 1621140 | 57142719 ~ 57206820 (+) |
| LOC110534354 | NA | other | downstream | 2136958 | 57645943 ~ 57671502 (+) |
| ankrd49 | LOC106602680 | other | downstream | 2925358 | 58456982 ~ 58517975 (+) |
