G908808


Basic Information

Item Value
gene id G908808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 58337442 ~ 58338648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1033624
AAATGTTAAACTTTATCaacagatttattttatttattaattggGACAACATTTTAACAGAACTGAAGAATGCAAAGTATATTGCTAACTTGTACTAAGAGTAGCTTCACAGTATACATTCATAATCTAGCTACAGATAGAAAAAAGTCAAAGATATTTGGTTGATTATATAAAACTGCAATTTTTAGTCGTAAAAGATTTGTTTGAGTAAGCTTTGGTTCATTCAGCCATTCTTAGggggaaagaatagggttttTGGGAAAAATGCAAAATAGcatctgaggttaacacaggcttaggggATGTTATACATTTTGATCTGAGATAATATCCAACAGTTAATAGGAACGTTATGAATGTAGCCTTTTGTGTTTTTTCTAATTAGCTGATGACGATTagctcctaagcctgtgtttaccacagaccctATTTTCAACATTTATCCCAAAAACATATCAAAACTCCATTCATTTTCCAATTGGGTTTGTTCAACTATCCATGGGGaaaaaaatacacacatttaCAACTGAGAATCACTGAACACAAAATGTGCTCAATGCATGTCTCATTTGACATGAATTTCACCTCCATCTCAGACCCTTTTCACACTATCGTGCTGACCCAACCGACACTGTGCAGCCCCTGATATTTTcctttcacattgtcctttccagcacaGCCACCGCAACTACACTGGATGCTTAACCAGGCCAGCGCAGTACAGCTCAActtgactcagtggtgtgaaaGGGGTTTGGGTATGCTTTCAAATTATTCTTATTGTGTATTTGTCACGCTGTCCCGGGCTGAACACAGGAAAGTAGTTGGATGTCTTCACATCAGTAAAAGTGTAAAGAAGTGACTTTGTATCAACATTATAAAAAGACAGAGTGTGTCTGTCACAGTCTAGAAACACTCCCACAATAGTGAGCTCTGCCACAGTTATTGGTGGTTGAGGGTCGGTATTGACTTGGAAACCTTTTTCTTTATCATAAGAAAGAATCCAAAATCCATTCTGTGGAGTTAAAGGAACAGTAGGTCTTCTCTCAACATTTTCTCTGGCCACACCAACATACCATGACAGTTTTTCTGTTGATGAATCCTTTACCTTCACTTCCCAATAGTGTTGTCCTGAACTGAAACTCTCTTTAGAAAACACATGGAGATGCGTTC

Function

NR:

description
butyrophilin subfamily 3 member A1-like isoform X31

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1033624 True 1173 lncRNA 0.38 2 58337442 58338648
Loading

Neighbor

gene id symbol gene type direction distance location
cdk2ap2 cdk2ap2 coding downstream 16148 58315358 ~ 58321294 (-)
LOC100135924 LOC106602690 coding downstream 37903 58293206 ~ 58299539 (-)
LOC118936717 LOC106602690 coding downstream 53821 58275783 ~ 58283621 (-)
LOC118936716 LOC106602693 coding downstream 125875 58179011 ~ 58211567 (-)
LOC110534357 LOC106602694 coding downstream 199365 58123022 ~ 58138077 (-)
LOC110533159 LOC106602682 coding upstream 103836 58442484 ~ 58446012 (-)
si:dkey-117m1.4 LOC106602678 coding upstream 153407 58492055 ~ 58505574 (-)
trnaa-ugc-42 NA coding upstream 162406 58501054 ~ 58501129 (-)
LOC110534374 LOC106602677 coding upstream 176377 58515025 ~ 58531499 (-)
LOC110534370 LOC106602675 coding upstream 206412 58545060 ~ 58552234 (-)
G908809 NA non-coding downstream 1996 58334262 ~ 58335446 (-)
G908790 NA non-coding downstream 36389 58280159 ~ 58301053 (-)
G908762 NA non-coding downstream 48052 58267969 ~ 58289390 (-)
G908746 NA non-coding downstream 122105 58214920 ~ 58215337 (-)
G908744 NA non-coding downstream 124154 58213073 ~ 58213288 (-)
G908801 NA non-coding upstream 36019 58374667 ~ 58444594 (-)
G908841 LOC106602705 non-coding upstream 60678 58399326 ~ 58453765 (-)
G908885 NA non-coding upstream 116611 58455259 ~ 58455550 (-)
G908886 NA non-coding upstream 116929 58455577 ~ 58455779 (-)
G908757 LOC106602690 other downstream 37899 58282651 ~ 58299543 (-)
G908286 NA other downstream 446825 57458240 ~ 57890617 (-)
G908994 NA other upstream 302747 58641395 ~ 58715830 (-)
G909040 NA other upstream 386572 58725220 ~ 58725644 (-)
G909071 NA other upstream 445696 58784344 ~ 58788738 (-)
G910026 NA other upstream 1032333 59370981 ~ 59376214 (-)

Expression

G908808 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.25.
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G908808 Expression in each Bioproject

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G908808 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network