Gene
RNA
| Item | Value |
|---|---|
| gene id | G909715 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 59885629 ~ 59940181 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1034706 | True | 347 | lncRNA | 0.41 | 2 | 59885629 | 59940181 |
59,860,000
59,870,000
59,880,000
59,890,000
59,900,000
59,910,000
59,920,000
59,930,000
59,940,000
59,950,000
59,960,000
59,970,000
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534405 | LOC106602553 | coding | upstream | 188554 | 59659610 ~ 59697075 (+) |
| LOC110534404 | LOC106602550 | coding | upstream | 237124 | 59641980 ~ 59648505 (+) |
| LOC110534398 | LOC106602548 | coding | upstream | 328035 | 59554626 ~ 59557594 (+) |
| trnat-agu-3 | NA | coding | upstream | 335873 | 59549683 ~ 59549756 (+) |
| LOC110534401 | NA | coding | upstream | 339094 | 59544551 ~ 59546535 (+) |
| LOC118937067 | NA | coding | downstream | 32923 | 59973104 ~ 59973159 (+) |
| LOC110534409 | LOC106602556 | coding | downstream | 295984 | 60236165 ~ 60334139 (+) |
| LOC110534410 | LOC106602558 | coding | downstream | 738193 | 60678374 ~ 60741479 (+) |
| sorbs2a | LOC106602561 | coding | downstream | 866968 | 60807149 ~ 60912819 (+) |
| LOC110534414 | alp | coding | downstream | 974162 | 60914343 ~ 60927020 (+) |
| G909532 | NA | non-coding | upstream | 180260 | 59704209 ~ 59705369 (+) |
| G909589 | NA | non-coding | upstream | 230349 | 59654997 ~ 59655280 (+) |
| G909588 | NA | non-coding | upstream | 231149 | 59654111 ~ 59654480 (+) |
| G909544 | NA | non-coding | upstream | 235751 | 59649103 ~ 59649878 (+) |
| G909578 | NA | non-coding | upstream | 264686 | 59619549 ~ 59620943 (+) |
| G909834 | NA | non-coding | downstream | 106703 | 60046884 ~ 60060254 (+) |
| G909903 | NA | non-coding | downstream | 210334 | 60150515 ~ 60150923 (+) |
| G910523 | LOC100194703 | non-coding | downstream | 269420 | 60209601 ~ 60209819 (+) |
| G910546 | NA | non-coding | downstream | 284199 | 60224380 ~ 60224599 (+) |
| G910606 | NA | non-coding | downstream | 377420 | 60317601 ~ 60319045 (+) |
| G909581 | NA | other | upstream | 246931 | 59624751 ~ 59638698 (+) |
| LOC110534399 | LOC106602650 | other | upstream | 342049 | 59540280 ~ 59544449 (+) |
| LOC110534381 | cldnd | other | upstream | 476686 | 59401708 ~ 59408944 (+) |
| ankrd49 | LOC106602680 | other | upstream | 1367654 | 58456982 ~ 58517975 (+) |
| LOC110534354 | NA | other | upstream | 2214173 | 57645943 ~ 57671502 (+) |
| G911148 | LOC106602559 | other | downstream | 802123 | 60742304 ~ 60755677 (+) |
| LOC110533174 | LOC106602527 | other | downstream | 1211083 | 61146124 ~ 61185835 (+) |
| G911611 | LOC106609905 | other | downstream | 1626176 | 61566357 ~ 61569062 (+) |
| si:dkey-9i23.4 | LOC106596523 | other | downstream | 1709576 | 61649733 ~ 61659500 (+) |
| G911652 | NA | other | downstream | 1717146 | 61657327 ~ 61658426 (+) |
