Gene
RNA
| Item | Value |
|---|---|
| gene id | G911531 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 61417921 ~ 61421148 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1036640 | True | 291 | lncRNA | 0.41 | 2 | 61417921 | 61421148 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533174 | LOC106602527 | coding | upstream | 232086 | 61146124 ~ 61185835 (+) |
| LOC110534424 | LOC106592462 | coding | upstream | 302863 | 61111829 ~ 61115058 (+) |
| LOC110534426 | LOC106592462 | coding | upstream | 322733 | 61092554 ~ 61095188 (+) |
| LOC110534427 | LOC106592462 | coding | upstream | 333739 | 61079761 ~ 61084182 (+) |
| LOC110534423 | LOC106602568 | coding | upstream | 340347 | 61053585 ~ 61077574 (+) |
| ssrp1b | LOC106602577 | coding | downstream | 156205 | 61577353 ~ 61599395 (+) |
| LOC110534941 | LOC106602642 | coding | downstream | 186733 | 61607881 ~ 61618461 (+) |
| si:dkey-9i23.4 | LOC106596523 | coding | downstream | 228585 | 61649733 ~ 61659500 (+) |
| tmem187 | tm187 | coding | downstream | 272195 | 61693343 ~ 61694713 (+) |
| ndufs8a | LOC106602580 | coding | downstream | 276426 | 61697574 ~ 61705213 (+) |
| G911409 | LOC100194703 | non-coding | upstream | 185265 | 61232290 ~ 61232656 (+) |
| G911404 | NA | non-coding | upstream | 196237 | 61221483 ~ 61221684 (+) |
| G911399 | NA | non-coding | upstream | 202699 | 61214956 ~ 61215222 (+) |
| G911392 | NA | non-coding | upstream | 213415 | 61204243 ~ 61204506 (+) |
| G911564 | NA | non-coding | downstream | 65403 | 61486551 ~ 61486759 (+) |
| G911566 | NA | non-coding | downstream | 70052 | 61491200 ~ 61491440 (+) |
| G911567 | NA | non-coding | downstream | 73150 | 61494298 ~ 61494499 (+) |
| G911569 | NA | non-coding | downstream | 75242 | 61496390 ~ 61505354 (+) |
| G911570 | NA | non-coding | downstream | 96749 | 61517897 ~ 61521640 (+) |
| G911148 | LOC106602559 | other | upstream | 673308 | 60742304 ~ 60755677 (+) |
| G909581 | NA | other | upstream | 1779223 | 59624751 ~ 59638698 (+) |
| LOC110534399 | LOC106602650 | other | upstream | 1874341 | 59540280 ~ 59544449 (+) |
| LOC110534381 | cldnd | other | upstream | 2008978 | 59401708 ~ 59408944 (+) |
| G911611 | LOC106609905 | other | downstream | 145209 | 61566357 ~ 61569062 (+) |
| G911652 | NA | other | downstream | 236179 | 61657327 ~ 61658426 (+) |
| G911667 | NA | other | downstream | 270121 | 61691269 ~ 61691638 (+) |
| G912025 | LOC106602626 | other | downstream | 816829 | 62237977 ~ 62335475 (+) |
