G911578


Basic Information

Item Value
gene id G911578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 61557774 ~ 61558083 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1036701
GTTTTCATCCCATAGAGCATTTCCCATCTTCCATAAATGAAATAGCAGTAGTGTGACAGACGGCAAATGGTACGATTTACAATAAACTAAATACATTCCCACCTTAATTTAGTCTCAAAAAAAGATATTTGTTGTTCAAATAACTCCactgaatgttcatttctttGAAGTCATTACATTTTGTCAAATTATTTTGCTTACTGGTTTCAGATGAAGACAGAGAGCACTCTGTCAGAGCGCCAGTAAAGAaacggagagatggaaagaaaagacctctcagcatctctccctcatccctctcttttgtAAA
>TU1036702
GTTTTCATCCCATAGAGCATTTCCCATCTTCCATAAATGAAATAGCAGTAGTGTGACAGACGGCAAATGGTACGATTTACAATAAACTAAATACATTCCCACCTTAATTTAGTCTCAAAAAAAGATATTTGTTGTTCAAATAACTCCactgaatgttcatttctttGAAGTCATTACATTTTGTCAAATTATTTTGCTTACTGGTTTCAGATGAAGACAGAGAGCACTCTGTCAGAGCGCCAGTAAAGAaacggagagatggaaagaaaagacctctcagcatctctccctcatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1036701 False 310 lncRNA 0.36 1 61557774 61558083
TU1036702 True 295 lncRNA 0.37 1 61557774 61558068

Neighbor

gene id symbol gene type direction distance location
LOC110533174 LOC106602527 coding upstream 371939 61146124 ~ 61185835 (+)
LOC110534424 LOC106592462 coding upstream 442716 61111829 ~ 61115058 (+)
LOC110534426 LOC106592462 coding upstream 462586 61092554 ~ 61095188 (+)
LOC110534427 LOC106592462 coding upstream 473592 61079761 ~ 61084182 (+)
LOC110534423 LOC106602568 coding upstream 480200 61053585 ~ 61077574 (+)
ssrp1b LOC106602577 coding downstream 19270 61577353 ~ 61599395 (+)
LOC110534941 LOC106602642 coding downstream 49798 61607881 ~ 61618461 (+)
si:dkey-9i23.4 LOC106596523 coding downstream 91650 61649733 ~ 61659500 (+)
tmem187 tm187 coding downstream 135260 61693343 ~ 61694713 (+)
ndufs8a LOC106602580 coding downstream 139491 61697574 ~ 61705213 (+)
G911570 NA non-coding upstream 36134 61517897 ~ 61521640 (+)
G911569 NA non-coding upstream 52420 61496390 ~ 61505354 (+)
G911567 NA non-coding upstream 63275 61494298 ~ 61494499 (+)
G911566 NA non-coding upstream 66334 61491200 ~ 61491440 (+)
G911564 NA non-coding upstream 71015 61486551 ~ 61486759 (+)
G911577 NA non-coding downstream 92 61558175 ~ 61559859 (+)
G911607 LOC108262771 non-coding downstream 4694 61562777 ~ 61563030 (+)
G911579 LOC106609905 non-coding downstream 5167 61563250 ~ 61563487 (+)
G911610 LOC106609905 non-coding downstream 6224 61564307 ~ 61564526 (+)
G911611 LOC106609905 non-coding downstream 8274 61566357 ~ 61569062 (+)
G911148 LOC106602559 other upstream 813161 60742304 ~ 60755677 (+)
G909581 NA other upstream 1919076 59624751 ~ 59638698 (+)
LOC110534399 LOC106602650 other upstream 2014194 59540280 ~ 59544449 (+)
LOC110534381 cldnd other upstream 2148831 59401708 ~ 59408944 (+)
G911652 NA other downstream 99244 61657327 ~ 61658426 (+)
G911667 NA other downstream 133186 61691269 ~ 61691638 (+)
G912025 LOC106602626 other downstream 679894 62237977 ~ 62335475 (+)

Expression

G911578 Expression in all Baseline Samples

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G911578 Expression in each Bioproject

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G911578 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network