Gene
RNA
| Item | Value |
|---|---|
| gene id | G912898 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 64162400 ~ 64163258 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1038228 | True | 859 | TUCP | 0.39 | 1 | 64162400 | 64163258 |
64,159,600
64,160,000
64,160,400
64,160,800
64,161,200
64,161,600
64,162,000
64,162,400
64,162,800
64,163,200
64,163,600
64,164,000
64,164,400
64,164,800
64,165,200
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534702 | LOC106610075 | coding | upstream | 20228 | 64129558 ~ 64142172 (+) |
| LOC110534716 | LOC106602410 | coding | upstream | 25240 | 64135705 ~ 64137160 (+) |
| LOC110534630 | NA | coding | upstream | 69933 | 64089471 ~ 64092467 (+) |
| LOC110534641 | LOC106602427 | coding | upstream | 79366 | 64068240 ~ 64083034 (+) |
| LOC110534667 | LOC106602444 | coding | upstream | 91810 | 64066892 ~ 64070590 (+) |
| trnak-cuu-5 | NA | coding | downstream | 6001 | 64169259 ~ 64169331 (+) |
| LOC110534481 | LOC106602441 | coding | downstream | 75942 | 64239200 ~ 64274530 (+) |
| LOC110534482 | vegfc | coding | downstream | 1020144 | 65183402 ~ 65235357 (+) |
| asb5b | LOC106602379 | coding | downstream | 1111174 | 65274432 ~ 65289182 (+) |
| LOC110534487 | LOC106602380 | coding | downstream | 1166282 | 65329540 ~ 65408744 (+) |
| G911892 | NA | non-coding | upstream | 18054 | 64143105 ~ 64144346 (+) |
| G911886 | NA | non-coding | upstream | 23467 | 64116011 ~ 64138933 (+) |
| LOC110534615 | LOC106602448 | non-coding | upstream | 60718 | 63977957 ~ 64121094 (+) |
| G911893 | NA | non-coding | upstream | 86216 | 64075707 ~ 64076184 (+) |
| G911905 | NA | non-coding | upstream | 146485 | 64015365 ~ 64015915 (+) |
| G912949 | NA | non-coding | downstream | 31556 | 64194814 ~ 64195706 (+) |
| G913053 | NA | non-coding | downstream | 230078 | 64393336 ~ 64394092 (+) |
| G913132 | NA | non-coding | downstream | 374494 | 64537752 ~ 64539704 (+) |
| G913160 | LOC100380853 | non-coding | downstream | 424900 | 64588158 ~ 64588390 (+) |
| si:ch211-89o9.6 | LOC106602402 | other | upstream | 2541 | 64152774 ~ 64169018 (+) |
| G911970 | LOC106602434 | other | upstream | 53079 | 64080084 ~ 64109321 (+) |
| LOC110534652 | zn271 | other | upstream | 243092 | 63914159 ~ 63944741 (+) |
| G911967 | LOC106610105 | other | upstream | 263907 | 63475194 ~ 63898493 (+) |
| G912027 | LOC106610072 | other | upstream | 747036 | 63394894 ~ 63415364 (+) |
| G913133 | NA | other | downstream | 376791 | 64540049 ~ 64541385 (+) |
| G915549 | NA | other | downstream | 674841 | 64838099 ~ 64839321 (+) |
| G916075 | LOC106602378 | other | downstream | 1109344 | 65272602 ~ 65273761 (+) |
| G916281 | NA | other | downstream | 1289844 | 65453102 ~ 65453500 (+) |
| LOC110533186 | LOC106610166 | other | downstream | 1463801 | 65522742 ~ 65632123 (+) |
