G919340


Basic Information

Item Value
gene id G919340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 68121090 ~ 68121635 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1045442
ctgagaaatcgaccggaaattacGGTCACggaaacgccgaaaaatattccaaattagttCCATAATAATCGACAGaaatggcaaatgttgtttataatcaatcttcaaggtgtttttcaaatatctattcgataatatatccaccgggacaattggtttttcagtaggaccgattggaaaaatggctacctctgtattttacgcgagagtcactctgagagccatcaggtgaccacttacacaatgtagccgcttacgggtattcttcaacataaatgcgtaaaactacgtcacaatgctgtagacaccttggggaatacgtagaaaaagtaatctggttgatagcccattcactgctcaatagggacgcattggaacgcagagctttcaaaacacgaggcacttccggattggatttttctcaggctttcgcctgcaatatcagttctgttatactcacagacaatatttttacagttttggaaactttagagtattttctatcctaagctgtcaattatatgcatattctagcatcttgtccta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1045442 True 546 lncRNA 0.39 1 68121090 68121635

Neighbor

gene id symbol gene type direction distance location
LOC110534531 LOC106610208 coding downstream 20717 68088017 ~ 68100373 (-)
LOC110534533 lsm6 coding downstream 171732 67947494 ~ 67949358 (-)
LOC110534526 LOC106610199 coding downstream 328393 67788943 ~ 67792697 (-)
LOC110534525 LOC106610223 coding downstream 488803 67587855 ~ 67632287 (-)
LOC110534524 tmem184c coding downstream 541285 67572386 ~ 67579805 (-)
LOC110534529 abce1 coding upstream 23848 68145483 ~ 68157358 (-)
LOC110534538 smarca5 coding upstream 317551 68439186 ~ 68449064 (-)
LOC110498449 il15 coding upstream 768340 68889975 ~ 68895368 (-)
trnaa-ugc-45 NA coding upstream 802419 68924054 ~ 68924126 (-)
LOC110498441 zn330 coding upstream 809849 68931484 ~ 68938354 (-)
G919337 NA non-coding downstream 8344 68112461 ~ 68112746 (-)
LOC110534530 LOC107598763 non-coding downstream 15131 68103753 ~ 68129353 (-)
G919336 NA non-coding downstream 20214 68100676 ~ 68100876 (-)
G919331 NA non-coding downstream 34743 68086001 ~ 68086347 (-)
G919328 NA non-coding downstream 37458 68083415 ~ 68083632 (-)
G919350 NA non-coding upstream 21546 68143181 ~ 68144127 (-)
G919351 NA non-coding upstream 22783 68144418 ~ 68144630 (-)
G919373 NA non-coding upstream 63324 68184959 ~ 68185207 (-)
G919448 NA non-coding upstream 124800 68246435 ~ 68256542 (-)
G920178 NA non-coding upstream 249230 68370865 ~ 68372157 (-)
G919311 LOC106610204 other downstream 64568 68053797 ~ 68056522 (-)
G918765 NA other downstream 628230 67492274 ~ 67492860 (-)
G918276 NA other downstream 971509 67133599 ~ 67149581 (-)
LOC118936728 NA other downstream 1582048 66534297 ~ 66539042 (-)
G920179 LOC106610230 other upstream 221865 68343500 ~ 68353935 (-)
G920568 tbc1d9 other upstream 866601 68988236 ~ 68988960 (-)
G920572 LOC106610251 other upstream 871151 68992786 ~ 68993226 (-)
G920579 LOC106610251 other upstream 878761 69000396 ~ 69000646 (-)
G920582 LOC106610250 other upstream 881644 69003279 ~ 69005227 (-)

Expression


Co-expression Network