XLOC_002812 (zgc:193742)


Basic Information

Item Value
gene id XLOC_002812
gene name zgc:193742
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 26991805 ~ 26999496 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005209
AAGCTGCTTTGCCAACCGACAAAaagcaaagaagaagaagaaggtcGTCAATGACATAAACGCTAGTTTTTGTTTTGAAACAGAAGAAAGCTCTACACGGGAGCTTGATACTGTACACATTTTACCCGAACATGTCGAATCCGCCGCCATTGTTAGAGCACACTCTAGAGGCCTTTTTTAACTGCTGGAGGTGTCGAGTCGTGGCCTGCGGGGGACTCATCGCTTCAGGACTGTTTGTGTTCGGGGCGGCGCGCAGAAGAAATCTGGGCAGACCCTTCAATTTATTCACAGCGGTTCAAATGGCGTCTGCCACAGGTTTGATCACCTCAGGCCTCTTAGTGATCGATGAAAGAGTGGGAATGAAGGATACAGGCAAATGACTCTGGACTTGATCTTCTACATTGTCATGGACTCTTTTATTAAATCAGCAAAGCCACATTGGGTTGATGCTGTGAATTTAAATCGTATTCAAATGACAAGTGtctttgattaaatgttttttatttgcaattta
>TCONS_00006059
AACTTGCCCGAATACAATAACAAATCGGAGCACTAAACGCTTCCGGTGTTTAAGGTCATTGGGACATGCCGATATGTTGCTCTTAAAGATGAAGCTAGTGGGCAGTTCTCTATTAAAATTGTGAATAATGAACATAAACAGTTTTATGAACAGAAGAGAACAATACTGAGAGCTTCGACACTTTCATCCGCTCGGAAACTACAGACTGTCACCTGAACATGTCCAATCCCGCGCCGCTGGAGGAGAAGGTGAGTCCGCAGAAGAGCAGCAGATCTGCGGCCGGAGACTGCTGGAGCTGCCGCCTGCTCTCCGGCGGAGGACTCATCGCTGCAGGGATTTATGTGTTCGCGCAAGTGCACAGGAGAAATCTCGGTAAACCCCCAACAGTGAGCGCGGTGTTACAGATGATGTTCGCCACAGGTCTGAGCGCCTGGGGGATTGTGCTGATCGCTAATCCGGTGGGAAAAATTACAAGCAAATAGCTTTGGACTGTTTCTTTATTGACATGGAATTTTATACTGAATCAGCAAAGCCATGTTGATGCTGCAAAGttaaatgaaatgtaaacaaTTGTCAAAATGTCATCAAACTTTcactaaatgttttaatttgcaaACTACAAAGTCTTGATTGTCACTGTCATCCTACTgatttacattttgattttattttacctCAGAAGGAACCTTACGCAACATGAGTATAGCTCATAAAGTGCACAAATGGGTTTGTTTTTATAAATCAGGTGGCTTTTCTACTATTATTTTAGTGACACAGCACCAGTTACAGTGAATTCTCTCCTCTGTGCCCTGCCGCTATCACTTGTTCTATTTTGCATTAACCTAAAAGGATCAACGTTTGTCCACAAAGTCAGTGTGtcaattattcattcactcattccgcttagtctctttatttatcaggggtcgccacagcggaatgaactgccaacttatccagcacatgttttcacacagcggatgcccttccagccacaacccaacactgggaaacacccatgcactcttgcattcacacacagaggaaacccctgccaacacggggagaacatgcaaacataatcaccccaggggtcgcaaaaaAAGGGAGAGGCTGAGggctttttatttgtatgttcattcattttctgccacttttctggGGCCGGATCGCAGGggtagcagtcttaggagagaaccccagacttccctctccccagacacttcctccagctcctccggggggatcccaaggcgttcccaggccagcctaGAGATATAGTCCCTCCATGCCTGGAAAACCTCCCTAGGTAGaagtccaggaggcatctgaaacagatgcccgagtaacctcagctgacttctctcgatgtggaggagcagcagctctactccaagctcctcccccTATCCATAAgtgtgcaccctgccacccttcgaaggaaactcattttggccgcttgtatccgagatcttgtcctttcggtcatgaccataggtgagagtaggagcgTAGATTGATTTGTAAggtgttgtttttaatttaactagTAACTACTATTTAGtttcttctgtgggttatggataacATATTGTAATTCtaacagtttaataaaataaagcattaggTTTATAGAAATCACTAAGCAACCTCTACTTTAGGAATATACACTCCACTCCAGCAGGTGGCCTAAATAAGCTGCTTTGCCAACCGACAAAaagcaaagaagaagaagaaggtcGTCAATGACATAAACGCTAGTTTTTGTTTTGAAACAGAAGAAAGCTCTACACGGGAGCTTGATACTGTACACATTTTACCCGAACATGTCGAATCCGCCGCCATTGTTAGAGCACACTCTAGAGGCCTTTTTTAACTGCTGGAGGTGTCGAGTCGTGGCCTGCGGGGGACTCATCGCTTCAGGACTGTTTGTGTTCGGGGCGGCGCGCAGAAGAAATCTGGGCAGACCCTTCAATTTATTCACAGCGGTTCAAATGGCGTCTGCCACAGGTTTGATCACCTCAGGCCTCTTAGTGATCGATGAAAGAGTGGGAATGAAGGATACAGGCAAATGACTCTGGACTTGATCTTCTACATTGTCATGGACTCTTTTATTAAATCAGCAAAGCCACATTGGGTTGATGCTGTGAATTTAAATCGTATTCAAATGACAAGTGtctttgattaaatgttttttatttgcaa
>TCONS_00005210
CAATAACAAATCGGAGCACTAAACGCTTCCGGTGTTTAAGGTCATTGGGACATGCCGATATGTTGCTCTTAAAGATGAAGCTAGTGGGCAGTTCTCTATTAAAATTGTGAATAATGAACATAAACAGTTTTATGAACAGAAGAGAACAATACTGAGAGCTTCGACACTTTCATCCGCTCGGAAACTACAGACTGTCACCTGAACATGTCCAATCCCGCGCCGCTGGAGGAGAAGGTGAGTCCGCAGAAGAGCAGCAGATCTGCGGCCGGAGACTGCTGGAGCTGCCGCCTGCTCTCCGGCGGAGGACTCATCGCTGCAGGGATTTATGTGTTCGCGCAAGTGCACAGGAGAAATCTCGGTAAACCCCCAACAGTGAGCGCGGTGTTACAGATGATGTTCGCCACAGGTCTGAGCGCCTGGGGGATTGTGCTGATCGCTAATCCGGTGGGAAAAATTACAAGCAAATAGCTTTGGACTGTTTCTTTATTGACATGGAATTTTATACTGAATCAGCAAAGCCATGTTGATGCTGCAAAGttaaatgaaatgtaaacaaTTGTCAAAATGTCATCAAACTTTcactaaatgttttaatttgcaaACTACAAAGTC

Function

symbol description
zgc:193742 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DMAC1 (distal membrane arm assembly component 1).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005747 mitochondrial respiratory chain complex I cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081022-37 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DMAC1 (distal membrane arm assembly component 1).
ZDB-GENE-030131-8991 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DMAC1 (distal membrane arm assembly component 1).

Ensembl:

ensembl_id ENSDARG00000092387 ENSDARG00000092787

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005209 False 514 mRNA 0.44 2 26991805 26997344
TCONS_00006059 False 2205 lncRNA 0.45 3 26991809 26999496
TCONS_00005210 True 612 mRNA 0.45 2 26998414 26999482

Neighbor

gene id symbol gene type direction distance location
XLOC_002811 MRPL49 coding downstream 1930 26987108 ~ 26989875 (-)
XLOC_002810 znhit2 coding downstream 6574 26982254 ~ 26985231 (-)
XLOC_002809 NA coding downstream 89500 26901272 ~ 26902305 (-)
XLOC_002808 CR545465.2 coding downstream 96729 26892567 ~ 26895076 (-)
XLOC_002807 NA coding downstream 119392 26836836 ~ 26872413 (-)
XLOC_002813 NA coding upstream 1066 27000562 ~ 27002614 (-)
XLOC_002814 uqcc3 coding upstream 6770 27006266 ~ 27009584 (-)
XLOC_002815 cnih2 coding upstream 28523 27028019 ~ 27049170 (-)
XLOC_002816 NA coding upstream 158441 27157937 ~ 27162145 (-)
XLOC_002817 BX248510.3 coding upstream 170460 27169956 ~ 27170072 (-)
XLOC_002802 NA non-coding downstream 544634 26441052 ~ 26447171 (-)
XLOC_002793 NA non-coding downstream 1300135 25690872 ~ 25691670 (-)
XLOC_002819 AL844197.1 non-coding upstream 414750 27414246 ~ 27414362 (-)
XLOC_002823 NA non-coding upstream 1198420 28197916 ~ 28291989 (-)

Expression


Co-expression Network