Gene
RNA
| Item | Value |
|---|---|
| gene id | G919981 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 69457048 ~ 69523313 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1046206 | True | 3700 | lncRNA | 0.44 | 3 | 69457048 | 69523313 |
69,390,000
69,400,000
69,410,000
69,420,000
69,430,000
69,440,000
69,450,000
69,460,000
69,470,000
69,480,000
69,490,000
69,500,000
69,510,000
69,520,000
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497353 | LOC106610255 | coding | upstream | 8153 | 69390433 ~ 69448895 (+) |
| LOC110534546 | uso1 | coding | upstream | 71383 | 69367641 ~ 69385665 (+) |
| LOC110534547 | LOC106610282 | coding | upstream | 92969 | 69354230 ~ 69364079 (+) |
| LOC118936733 | abcg2 | coding | upstream | 128107 | 69311098 ~ 69328941 (+) |
| LOC110516113 | LOC106602316 | coding | upstream | 152041 | 69294996 ~ 69305007 (+) |
| LOC118936736 | NA | coding | downstream | 10656 | 69533969 ~ 69538114 (+) |
| spag5 | LOC106602330 | coding | downstream | 14948 | 69538261 ~ 69549364 (+) |
| bnc2 | LOC106602311 | coding | downstream | 266454 | 69789767 ~ 70092229 (+) |
| psip1a | LOC106610301 | coding | downstream | 715920 | 70239233 ~ 70259692 (+) |
| LOC110497341 | LOC106610300 | coding | downstream | 751486 | 70274799 ~ 70291516 (+) |
| G919990 | NA | non-coding | upstream | 1173 | 69455662 ~ 69455875 (+) |
| G919986 | NA | non-coding | upstream | 4715 | 69452026 ~ 69452333 (+) |
| G919985 | NA | non-coding | upstream | 13266 | 69439275 ~ 69443782 (+) |
| G919958 | NA | non-coding | upstream | 68683 | 69388075 ~ 69388365 (+) |
| G919957 | NA | non-coding | upstream | 69639 | 69387060 ~ 69387409 (+) |
| G920013 | NA | non-coding | downstream | 211 | 69523524 ~ 69523899 (+) |
| G920029 | LOC102788504 | non-coding | downstream | 61368 | 69584681 ~ 69589653 (+) |
| G920033 | NA | non-coding | downstream | 69319 | 69592632 ~ 69593476 (+) |
| G920048 | NA | non-coding | downstream | 116062 | 69639375 ~ 69639661 (+) |
| G920060 | NA | non-coding | downstream | 160052 | 69683365 ~ 69683644 (+) |
| G919839 | NA | other | upstream | 391353 | 69065442 ~ 69065695 (+) |
| LOC110534534 | LOC106610230 | other | upstream | 1084688 | 68341142 ~ 68372360 (+) |
| G919180 | NA | other | upstream | 1279995 | 68176638 ~ 68177053 (+) |
| G919123 | NA | other | upstream | 1378115 | 68078391 ~ 68078933 (+) |
| G918319 | NA | other | upstream | 2206856 | 67247082 ~ 67252193 (+) |
| LOC110497329 | lef1 | other | downstream | 912292 | 70435605 ~ 70490782 (+) |
| G921487 | loxe3 | other | downstream | 1281027 | 70804340 ~ 70879949 (+) |
| LOC110534564 | LOC106593018 | other | downstream | 1292593 | 70738824 ~ 70819464 (+) |
| G921573 | NA | other | downstream | 1374431 | 70897744 ~ 70899209 (+) |
| G921586 | LOC107757009 | other | downstream | 1400518 | 70921980 ~ 70956737 (+) |
