Gene
RNA
| Item | Value |
|---|---|
| gene id | G919975 |
| gene name | anp32b |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 69459151 ~ 69462901 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| anp32b | Predicted to enable histone binding activity. Predicted to be involved in regulation of apoptotic process. Predicted to be active in nucleus. Is expressed in several structures, including alar plate midbrain region; hematopoietic system; nervous system; optic vesicle; and ventral mesoderm. Orthologous to human ANP32B (acidic nuclear phosphoprotein 32 family member B). |
| description |
|---|
| PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1046197 | True | 1145 | lncRNA | 0.39 | 3 | 69459151 | 69462901 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497353 | LOC106610255 | coding | upstream | 10256 | 69390433 ~ 69448895 (+) |
| LOC110534546 | uso1 | coding | upstream | 73486 | 69367641 ~ 69385665 (+) |
| LOC110534547 | LOC106610282 | coding | upstream | 95072 | 69354230 ~ 69364079 (+) |
| LOC118936733 | abcg2 | coding | upstream | 130210 | 69311098 ~ 69328941 (+) |
| LOC110516113 | LOC106602316 | coding | upstream | 154144 | 69294996 ~ 69305007 (+) |
| hemgn | LOC106610275 | coding | downstream | 3089 | 69465990 ~ 69469003 (+) |
| LOC110497347 | nap1 | coding | downstream | 6430 | 69469331 ~ 69473969 (+) |
| LOC110519070 | LOC106602331 | coding | downstream | 14965 | 69477866 ~ 69498203 (+) |
| LOC110515879 | LOC106602331 | coding | downstream | 39561 | 69502462 ~ 69513163 (+) |
| LOC118936736 | NA | coding | downstream | 71068 | 69533969 ~ 69538114 (+) |
| G919990 | NA | non-coding | upstream | 3276 | 69455662 ~ 69455875 (+) |
| G919986 | NA | non-coding | upstream | 6818 | 69452026 ~ 69452333 (+) |
| G919985 | NA | non-coding | upstream | 15369 | 69439275 ~ 69443782 (+) |
| G919958 | NA | non-coding | upstream | 70786 | 69388075 ~ 69388365 (+) |
| G919957 | NA | non-coding | upstream | 71742 | 69387060 ~ 69387409 (+) |
| G920013 | NA | non-coding | downstream | 60623 | 69523524 ~ 69523899 (+) |
| G920029 | LOC102788504 | non-coding | downstream | 121780 | 69584681 ~ 69589653 (+) |
| G920033 | NA | non-coding | downstream | 129731 | 69592632 ~ 69593476 (+) |
| G920048 | NA | non-coding | downstream | 176474 | 69639375 ~ 69639661 (+) |
| G919839 | NA | other | upstream | 393456 | 69065442 ~ 69065695 (+) |
| LOC110534534 | LOC106610230 | other | upstream | 1086791 | 68341142 ~ 68372360 (+) |
| G919180 | NA | other | upstream | 1282098 | 68176638 ~ 68177053 (+) |
| G919123 | NA | other | upstream | 1380218 | 68078391 ~ 68078933 (+) |
| G918319 | NA | other | upstream | 2208959 | 67247082 ~ 67252193 (+) |
| LOC110497329 | lef1 | other | downstream | 972704 | 70435605 ~ 70490782 (+) |
| G921487 | loxe3 | other | downstream | 1341439 | 70804340 ~ 70879949 (+) |
| LOC110534564 | LOC106593018 | other | downstream | 1353005 | 70738824 ~ 70819464 (+) |
| G921573 | NA | other | downstream | 1434843 | 70897744 ~ 70899209 (+) |
| G921586 | LOC107757009 | other | downstream | 1460930 | 70921980 ~ 70956737 (+) |
