Gene
RNA
| Item | Value |
|---|---|
| gene id | G921519 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 70743699 ~ 70744295 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1048005 | True | 474 | lncRNA | 0.37 | 2 | 70743699 | 70744295 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497318 | LOC106610360 | coding | upstream | 6840 | 70676444 ~ 70736859 (+) |
| LOC110534949 | dkk2 | coding | upstream | 132451 | 70592817 ~ 70611248 (+) |
| LOC110497322 | papss1 | coding | upstream | 182780 | 70527490 ~ 70560919 (+) |
| LOC110497329 | lef1 | coding | upstream | 252917 | 70435605 ~ 70490782 (+) |
| LOC100135902 | LOC100135902 | coding | upstream | 414667 | 70323416 ~ 70329032 (+) |
| LOC110491145 | LOC106602268 | coding | downstream | 81988 | 70826283 ~ 70856864 (+) |
| LOC110492555 | LOC106602285 | coding | downstream | 122239 | 70866534 ~ 70875776 (+) |
| LOC110514910 | LOC106602285 | coding | downstream | 133696 | 70877991 ~ 70893771 (+) |
| LOC110497313 | LOC106602288 | coding | downstream | 283271 | 71027566 ~ 71031915 (+) |
| LOC110497315 | LOC106602282 | coding | downstream | 309871 | 71054166 ~ 71062433 (+) |
| G921514 | NA | non-coding | upstream | 14470 | 70728494 ~ 70729229 (+) |
| G921505 | NA | non-coding | upstream | 34649 | 70708297 ~ 70709050 (+) |
| G921503 | NA | non-coding | upstream | 37433 | 70706055 ~ 70706266 (+) |
| G921502 | NA | non-coding | upstream | 38165 | 70705331 ~ 70705534 (+) |
| G921499 | NA | non-coding | upstream | 41658 | 70701813 ~ 70702041 (+) |
| G921586 | LOC107757009 | non-coding | downstream | 177685 | 70921980 ~ 70956737 (+) |
| G921599 | NA | non-coding | downstream | 201930 | 70946225 ~ 70947045 (+) |
| G921606 | NA | non-coding | downstream | 214488 | 70958783 ~ 70959029 (+) |
| G921788 | NA | non-coding | downstream | 229407 | 70973702 ~ 70974067 (+) |
| G921804 | NA | non-coding | downstream | 262121 | 71006416 ~ 71007496 (+) |
| G919839 | NA | other | upstream | 1678004 | 69065442 ~ 69065695 (+) |
| LOC110534534 | LOC106610230 | other | upstream | 2371339 | 68341142 ~ 68372360 (+) |
| G919180 | NA | other | upstream | 2566646 | 68176638 ~ 68177053 (+) |
| G919123 | NA | other | upstream | 2664766 | 68078391 ~ 68078933 (+) |
| G921487 | loxe3 | other | downstream | 60045 | 70804340 ~ 70879949 (+) |
| LOC110534564 | LOC106593018 | other | downstream | 71611 | 70738824 ~ 70819464 (+) |
| G921573 | NA | other | downstream | 153449 | 70897744 ~ 70899209 (+) |
| G921853 | NA | other | downstream | 357925 | 71102220 ~ 71103281 (+) |
