G921863


Basic Information

Item Value
gene id G921863
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 71063227 ~ 71063678 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1048383
CTTTTACTGTGAGGCAAGACCAGGGCAGTTATGATGCTAGATGACGCACATCTGTGTGCCTGTGTATAGTTTAATAGTGAAATGTATTTATAACCACTAAACAATTATATTACGATTATCTCTCTCCATTTGATTTGAATGATATATGATGAGGCAACGGTTATTTCTGAGTGACAACCCCCCCACTCTAACATTTATACTATCGTTTTCCCAAAGCACTTCCTTTCTTTtcagaaaaaaaaacaatgtaataaaatattacaaaacattttatttaagatAAGAAAATCAGTAGATTATTGTAAATGTGTTTAAAATAAATTATGCCACATTGTACATACCATGTGTTTGTATTACGGAAATACAATTGTTGATTTTTAATAACAACCTACTATTGTAATATGTTAAAAGGTGTAGGTTTCTTGTAATTTTGTCAAATGTACCCACGGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1048383 True 452 lncRNA 0.31 1 71063227 71063678

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-47 NA coding downstream 2333 71060819 ~ 71060894 (-)
LOC110497308 arhgef38 coding downstream 11547 71032015 ~ 71051680 (-)
LOC110497311 gstcd coding downstream 35735 70965392 ~ 71027492 (-)
LOC118936741 npnt coding downstream 106469 70897730 ~ 70956758 (-)
LOC110534563 aimp1 coding downstream 386871 70652361 ~ 70676356 (-)
LOC110533203 LOC106610354 coding upstream 1021 71064699 ~ 71121753 (-)
LOC110497184 LOC106610366 coding upstream 274103 71337781 ~ 71372279 (-)
LOC110497174 LOC106610327 coding upstream 311477 71375155 ~ 71377159 (-)
LOC110518698 LOC106591917 coding upstream 324064 71387742 ~ 71398897 (-)
si:ch211-108d22.2 LOC106610364 coding upstream 335312 71398990 ~ 71404774 (-)
G921898 NA non-coding downstream 46805 71016209 ~ 71016422 (-)
G921897 NA non-coding downstream 47151 71015616 ~ 71016076 (-)
G921886 NA non-coding downstream 63289 70999389 ~ 70999938 (-)
G921869 NA non-coding downstream 94450 70967939 ~ 70968777 (-)
G921774 NA non-coding downstream 103364 70959601 ~ 70959863 (-)
G921915 NA non-coding upstream 30731 71094409 ~ 71094916 (-)
G921955 NA non-coding upstream 114896 71178574 ~ 71178923 (-)
G921962 NA non-coding upstream 131103 71194781 ~ 71195177 (-)
G921967 NA non-coding upstream 145371 71209049 ~ 71210052 (-)
G921899 NA other downstream 46298 71016496 ~ 71016929 (-)
G921677 LOC106602265 other downstream 246925 70746687 ~ 70816302 (-)
G921673 LOC106602265 other downstream 321908 70738540 ~ 70798813 (-)
G921389 papss1 other downstream 533765 70527538 ~ 70533352 (-)
LOC110516757 LOC106610305 other downstream 708082 70328344 ~ 70355179 (-)
LOC118936934 LOC106597769 other upstream 531812 71595152 ~ 71597145 (-)
LOC118936746 LOC106602209 other upstream 598097 71658344 ~ 71665901 (-)
LOC110534950 LOC106595337 other upstream 682137 71744768 ~ 71752698 (-)
LOC110514144 LOC106602209 other upstream 698783 71747636 ~ 71765505 (-)

Expression


Co-expression Network