G922374


Basic Information

Item Value
gene id G922374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 71612119 ~ 71722343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1049001
TAACATAACTATTCTTATTTTCTTTCTGCCATTCTCTTAATTTTCTTCTTCATCTCAGTTTGTGTTTCTTCAATTCCTCACCTCCTATCAACCCTATTGGGAGAGAAGGTCCAAGGTCCCTCCCCTAGGATTGTATTCTCCAGTGTGTTTTGAGACAGTCTATAATACCATTATTTCACCTCCTTGGTGAGTTCATCTCTCATTTAAACCACTAGGTGGaatcatcacttaaccattcaggACTTTATCCAACTGAAGGGTTACATTTGATTTTGTGGGTCTTCTAAAGACCCCCACCATTGATTATGTTGTTACTAATTTGCTTTCGTGCCATTGTACTTTTGCTCACTCTATAGCTGAATATTGAGGCCTCTGTCTGTGTCTAGCTTTCTGCCAAAACCCACCGCCCAGCGTCTGTGAGGAAAGGTGAGAAAAGGGACTGAGGGtgatagcgagacagagagagacagtgtctgTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGTGTCTGTTTTTCTCTAAAACAAGGGCAGCTTTGCATACTGCTGAGACAGTGTCTGTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGCGTCTGTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGGTTCTGTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGGTTCTGTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGGTTCTGTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGTGCCTGTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGTGCCTGTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGTGCCTGTTTTTCTCTAAAACAAGGGCAGATTTGCATACTGCTGAGACAGGTTCTCAGAAACCTTGTGTTAAGAATAACTTTAGCTGCACATGCAGGTTTTGACATAGGAGATCACACCATAAGGTCTGACCTCGGGTATATAAGATGGCGTCTTTCTTTTGTTCGGGGCAGAACTCAGGAGAGACATCAGTTGTATGTCTGATGTTTGATCTTTGACTTCTGTCTACGGCTGTCTTCTAATTATATATGCACATTTTAACTATTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1049001 True 1177 lncRNA 0.41 3 71612119 71722343

Neighbor

gene id symbol gene type direction distance location
LOC118966646 LOC106595337 coding downstream 9529 71597215 ~ 71602590 (-)
LOC118936934 LOC106597769 coding downstream 15095 71595152 ~ 71597145 (-)
LOC110515428 mxd4 coding downstream 95753 71477149 ~ 71516366 (-)
LOC110534568 NA coding downstream 135921 71472446 ~ 71476198 (-)
LOC110497182 LOC106610322 coding downstream 161360 71447845 ~ 71450759 (-)
LOC118936748 LOC106602203 coding upstream 6488 71728831 ~ 71734927 (-)
LOC110534950 LOC106595337 coding upstream 22425 71744768 ~ 71752698 (-)
LOC110534519 NA coding upstream 37262 71759605 ~ 71761025 (-)
LOC110514144 LOC106602209 coding upstream 39076 71747636 ~ 71765505 (-)
LOC118966648 LOC106610349 coding upstream 58242 71780585 ~ 71784330 (-)
G922341 NA non-coding downstream 69214 71539938 ~ 71542905 (-)
G922333 NA non-coding downstream 89505 71522304 ~ 71522614 (-)
G922329 NA non-coding downstream 112364 71498925 ~ 71499755 (-)
LOC110497179 LOC106610325 non-coding downstream 202107 71406747 ~ 71435265 (-)
G922285 NA non-coding downstream 307425 71303881 ~ 71304694 (-)
G922407 NA non-coding upstream 73852 71796195 ~ 71849264 (-)
G922404 NA non-coding upstream 112390 71834733 ~ 71836224 (-)
LOC110533203 LOC106610354 other downstream 530607 71064699 ~ 71121753 (-)
G921899 NA other downstream 595190 71016496 ~ 71016929 (-)
G921677 LOC106602265 other downstream 795817 70746687 ~ 70816302 (-)
G921673 LOC106602265 other downstream 870800 70738540 ~ 70798813 (-)
G923192 LOC106610383 other upstream 1183234 72905577 ~ 72928468 (-)
G924041 NA other upstream 1907799 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 3194834 74890707 ~ 74932952 (-)

Expression


Co-expression Network