Gene
RNA
| Item | Value |
|---|---|
| gene id | G922376 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 71616765 ~ 71618259 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1049004 | False | 269 | lncRNA | 0.38 | 3 | 71616765 | 71618259 |
| TU1049005 | False | 269 | lncRNA | 0.38 | 3 | 71616765 | 71618259 |
| TU1049007 | True | 330 | lncRNA | 0.37 | 3 | 71617522 | 71618259 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966646 | LOC106595337 | coding | downstream | 14175 | 71597215 ~ 71602590 (-) |
| LOC118936934 | LOC106597769 | coding | downstream | 19741 | 71595152 ~ 71597145 (-) |
| LOC110515428 | mxd4 | coding | downstream | 100399 | 71477149 ~ 71516366 (-) |
| LOC110534568 | NA | coding | downstream | 140567 | 71472446 ~ 71476198 (-) |
| LOC110497182 | LOC106610322 | coding | downstream | 166006 | 71447845 ~ 71450759 (-) |
| LOC118936746 | LOC106602209 | coding | upstream | 40085 | 71658344 ~ 71665901 (-) |
| LOC118936748 | LOC106602203 | coding | upstream | 110572 | 71728831 ~ 71734927 (-) |
| LOC110534950 | LOC106595337 | coding | upstream | 126509 | 71744768 ~ 71752698 (-) |
| LOC110534519 | NA | coding | upstream | 141346 | 71759605 ~ 71761025 (-) |
| LOC110514144 | LOC106602209 | coding | upstream | 143160 | 71747636 ~ 71765505 (-) |
| G922341 | NA | non-coding | downstream | 73860 | 71539938 ~ 71542905 (-) |
| G922333 | NA | non-coding | downstream | 94151 | 71522304 ~ 71522614 (-) |
| G922329 | NA | non-coding | downstream | 117010 | 71498925 ~ 71499755 (-) |
| LOC110497179 | LOC106610325 | non-coding | downstream | 206753 | 71406747 ~ 71435265 (-) |
| G922285 | NA | non-coding | downstream | 312071 | 71303881 ~ 71304694 (-) |
| G922411 | NA | non-coding | upstream | 92039 | 71710298 ~ 71711040 (-) |
| LOC110533203 | LOC106610354 | other | downstream | 535253 | 71064699 ~ 71121753 (-) |
| G921899 | NA | other | downstream | 599836 | 71016496 ~ 71016929 (-) |
| G921677 | LOC106602265 | other | downstream | 800463 | 70746687 ~ 70816302 (-) |
| G921673 | LOC106602265 | other | downstream | 875446 | 70738540 ~ 70798813 (-) |
| G923192 | LOC106610383 | other | upstream | 1287318 | 72905577 ~ 72928468 (-) |
| G924041 | NA | other | upstream | 2011883 | 73630142 ~ 73631970 (-) |
