G922404


Basic Information

Item Value
gene id G922404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 71834733 ~ 71836224 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1049037
TACTCATAAACCCATTGATATACATACAATAACTTTTGATTTTACTTCTAATGTGTCACAGTTTATATCTCACCTATCACAAAAAGCTTTGTTATCCAGGATGTTGTAGCTGGTCTCTTTAttcaggttgttgtatctggtctgtaactAGTCTCCCTCTTTAGTCAAgttgttgtatctggtctctttagtcaggttgtacAGTAACATATCATCAGGTtgtcaggttgttgtatctggtctgtaactCTGCTGTTGTGTTAGTCTTATAAAGGGAAAAACTCTGGTTGTTCCTTTTATCCTCAGAATCTTTGATTTCTCTGTTATCAACAAAGTATAAACACAGAGTTACTAAGTAAAACACCAGGTAAATAGGCATAGTAACCTCTACTTCTTACAACTATGTGATAATCAATGAACGTGGACACAAACTCACAATAGACAGACAGGCCTGTTATGCcagccagtagaacacacagcagccccagaaACACTGCAGCAACTAGGAAGGGTCTCTTCCCTGAGCTATCAGGCTCTGTGGAAACAAACAAGAGACTTTTACCTTgttatattgagagagagagagtgtgtgtgtgtgtgtgttacttgagTGCTGGTCTCCTGGTCCATTATTAGgagcagtctctctctcatctcttttggTGCTGGTCTCACCATCTCTCAGGGTGTCTGCACTGATGTAGATATCCacaatcctctcctccatctcacctctGTCAAACTTGACCTTCTTGTTCATATCTGGTTCAGTATAGATGACCTTTGACATCTTTAACAATAACTGGGTCTTTCTTtctatgtaggtctactatacATGAAGTCTCTGCTTCTAGAATTAATGTggtggtcttccaacatggccaCCAGGAGGTGTCGTACGTCAACTGCAAGACCTCTGTACGTTAAGTCTCTGCTTCTCGTGgtatctctgtctctgagtcatgtgtgtgtctgtcacaccctgaccatagtttactttgtatgtttctatgttttggttggtcagggtgtgatctgagtgggcattctatgttacatgtctagtttgtccagttctatgttcggcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcc

Function

NR:

description
PREDICTED: C-type lectin domain family 4 member F-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1049037 True 1190 lncRNA 0.42 2 71834733 71836224

Neighbor

gene id symbol gene type direction distance location
LOC118966648 LOC106610349 coding downstream 50403 71780585 ~ 71784330 (-)
LOC110514144 LOC106602209 coding downstream 69228 71747636 ~ 71765505 (-)
LOC110534519 NA coding downstream 73708 71759605 ~ 71761025 (-)
LOC110534950 LOC106595337 coding downstream 82035 71744768 ~ 71752698 (-)
LOC118936748 LOC106602203 coding downstream 99806 71728831 ~ 71734927 (-)
LOC110534569 sgcz coding upstream 168599 72004823 ~ 72351589 (-)
LOC110534795 LOC106602193 coding upstream 737966 72574190 ~ 72578685 (-)
LOC110497295 LOC106602191 coding upstream 812112 72648336 ~ 72661638 (-)
LOC110534773 fgl1 coding upstream 910745 72746969 ~ 72755067 (-)
LOC110534766 LOC106610393 coding upstream 928186 72764410 ~ 72770434 (-)
G922411 NA non-coding downstream 123693 71710298 ~ 71711040 (-)
LOC118936746 LOC106602209 non-coding downstream 174118 71658344 ~ 71665901 (-)
G922488 NA non-coding upstream 85257 71921481 ~ 71921718 (-)
G922504 NA non-coding upstream 105409 71941633 ~ 71942679 (-)
G922516 NA non-coding upstream 116056 71952280 ~ 71952479 (-)
G922522 NA non-coding upstream 123551 71959775 ~ 71960044 (-)
G922536 NA non-coding upstream 138443 71974667 ~ 71974953 (-)
LOC118936934 LOC106597769 other downstream 237588 71595152 ~ 71597145 (-)
LOC110533203 LOC106610354 other downstream 753221 71064699 ~ 71121753 (-)
G923192 LOC106610383 other upstream 1069353 72905577 ~ 72928468 (-)
G924041 NA other upstream 1793918 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 3080953 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 3101681 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 3216892 75053116 ~ 75056174 (-)

Expression


Co-expression Network