G922568


Basic Information

Item Value
gene id G922568
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72064731 ~ 72104814 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1049242
TAAGAGACAGGtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatattatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatattatacatgtt
>TU1049241
GTGTTATACTAtatatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatattatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatactatacatgttgatgagaactagaaccctcacagtactgtacagtatgagtgttatattatacatgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1049242 False 377 lncRNA 0.36 3 72064731 72104814
TU1049241 True 418 TUCP 0.36 2 72104340 72104814

Neighbor

gene id symbol gene type direction distance location
LOC118936749 LOC106602257 coding upstream 234417 71826123 ~ 71830314 (+)
LOC110533211 LOC106610423 coding upstream 347677 71708821 ~ 71717054 (+)
LOC118936747 LOC106602241 coding upstream 363538 71700308 ~ 71701193 (+)
LOC118966647 LOC108260735 coding upstream 384194 71676025 ~ 71680537 (+)
LOC110534566 LOC106610319 coding upstream 486785 71560146 ~ 71579948 (+)
LOC110534796 LOC106602198 coding downstream 257587 72362401 ~ 72466334 (+)
LOC110534793 LOC106534744 coding downstream 475997 72580811 ~ 72631442 (+)
LOC118937055 NA coding downstream 527785 72632599 ~ 72632814 (+)
LOC118937058 NA coding downstream 528513 72633327 ~ 72633542 (+)
LOC118937057 NA coding downstream 529457 72634271 ~ 72634486 (+)
G922559 NA non-coding upstream 28176 72036331 ~ 72036555 (+)
G922555 NA non-coding upstream 48696 72015635 ~ 72016035 (+)
G922554 NA non-coding upstream 50018 72014390 ~ 72014713 (+)
G922553 NA non-coding upstream 50569 72013955 ~ 72014162 (+)
G922551 NA non-coding upstream 53866 72010652 ~ 72010865 (+)
G922605 LOC100194703 non-coding downstream 69893 72174707 ~ 72174919 (+)
G922607 NA non-coding downstream 82709 72187523 ~ 72187725 (+)
G922617 NA non-coding downstream 111397 72216211 ~ 72216523 (+)
G922620 NA non-coding downstream 118816 72223630 ~ 72224130 (+)
G922622 NA non-coding downstream 120302 72225116 ~ 72225317 (+)
G921853 NA other upstream 961450 71102220 ~ 71103281 (+)
G921586 LOC107757009 other upstream 1136098 70921980 ~ 70956737 (+)
G921573 NA other upstream 1165522 70897744 ~ 70899209 (+)
G921487 loxe3 other upstream 1184782 70804340 ~ 70879949 (+)
LOC110497298 vps37a other downstream 541695 72637369 ~ 72648191 (+)
G923075 LOC106610393 other downstream 659628 72764442 ~ 72766219 (+)
LOC118936484 LOC106602173 other downstream 762620 72856302 ~ 72879600 (+)
G923430 NA other downstream 1096133 73200947 ~ 73203524 (+)
G923434 NA other downstream 1109673 73214487 ~ 73215458 (+)
LOC110534564 LOC106593018 other upstream 1287371 70738824 ~ 70819464 (+)

Expression

G922568 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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G922568 Expression in each Bioproject

Bar chart with 16 bars.
G922568 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Co-expression Network